Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_G22
         (656 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0479 + 3671792-3671844,3671950-3675691,3675815-3675895,367...    28   7.5  
03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,487...    28   7.5  
09_04_0654 - 19247051-19247305,19247466-19247534,19247618-192477...    23   8.6  
05_04_0048 - 17493775-17494431,17494506-17494801,17494851-174949...    27   9.9  

>03_01_0479 +
           3671792-3671844,3671950-3675691,3675815-3675895,
           3675973-3676042,3676157-3676224
          Length = 1337

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 48  ALVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLXKKIYGDCVN 200
           AL+K +DK ++ +G IRQL     +++K    LS   Q    KK  GD +N
Sbjct: 306 ALIK-KDKFLQAIGIIRQLKDLNIQMSKG--SLSAVTQEFCKKKDIGDMMN 353


>03_01_0005 +
           46370-46454,46962-47071,47381-47545,47672-48463,
           48730-48840,48935-49195,49415-49638,49735-49855,
           50673-51214,51302-51488,51569-51895,52047-52197,
           52287-52424,52918-53013,53276-53357,54411-54679,
           54769-54882,55050-55288,55488-55715,55799-55951,
           56479-56616,57061-57188,57598-57718,58142-58306,
           59486-59633,59772-59898,60025-60118,60119-60268,
           60577-60624,60712-60819,61040-61114,61225-61275,
           61341-61487,61584-61714,61944-62031,62204-62266,
           62336-62582,62830-62981,63056-63126,63214-63370,
           63520-63687
          Length = 2323

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 147 IDQDVFCLTLCKPETIVLYHPNI 79
           +D D   L + KP  I++YHP+I
Sbjct: 301 LDSDQHVLDVWKPSVIIVYHPDI 323


>09_04_0654 -
           19247051-19247305,19247466-19247534,19247618-19247705,
           19248010-19248105,19248650-19248763,19248852-19248985,
           19249880-19250326
          Length = 400

 Score = 23.0 bits (47), Expect(2) = 8.6
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 338 FACEQRRCRLCSSAVYIRTNHAFWS*YSTIFNGTRTTV 451
           F  E  R   C++A  +  NHA    +ST    T TT+
Sbjct: 135 FGVESSRIAKCAAATEVGCNHAQSVGFSTDGFATTTTM 172



 Score = 23.0 bits (47), Expect(2) = 8.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 560 TQKKKTGARWTTNRIEIQL 616
           T  +K G  W TNR+ I++
Sbjct: 170 TTMRKLGLIWVTNRMHIEI 188


>05_04_0048 -
           17493775-17494431,17494506-17494801,17494851-17494958,
           17495463-17495544,17495561-17495740
          Length = 440

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 402 PSGVDTLQFLTEPGPQF 452
           PSG+DT QF+   GP+F
Sbjct: 376 PSGMDTRQFVRSQGPEF 392


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,882,218
Number of Sequences: 37544
Number of extensions: 328000
Number of successful extensions: 687
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)