Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_G22
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC030157-1|AAH30157.2| 517|Homo sapiens GTF3C5 protein protein. 64 4e-10
BC017337-1|AAH17337.1| 519|Homo sapiens general transcription f... 64 4e-10
BC011355-1|AAH11355.1| 519|Homo sapiens GTF3C5 protein protein. 64 4e-10
AY007123-1|AAG01991.1| 519|Homo sapiens protein ( Homo sapiens ... 64 4e-10
AL162417-4|CAI13408.1| 457|Homo sapiens general transcription f... 64 4e-10
AL162417-3|CAI13407.1| 526|Homo sapiens general transcription f... 64 4e-10
AL162417-2|CAI13406.1| 519|Homo sapiens general transcription f... 64 4e-10
AF133124-1|AAD41476.1| 519|Homo sapiens transcription factor II... 64 4e-10
AL162417-1|CAI13405.1| 244|Homo sapiens general transcription f... 56 8e-08
AK097295-1|BAC04993.1| 509|Homo sapiens protein ( Homo sapiens ... 50 7e-06
BC009741-1|AAH09741.2| 449|Homo sapiens GTF3C5 protein protein. 49 2e-05
AL162417-5|CAI13409.1| 224|Homo sapiens general transcription f... 31 3.6
>BC030157-1|AAH30157.2| 517|Homo sapiens GTF3C5 protein protein.
Length = 517
Score = 64.1 bits (149), Expect = 4e-10
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Frame = +3
Query: 51 LVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLXKKIYGDCVNTAGVLLKVKV 230
+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+ +LL+++
Sbjct: 30 VVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTSSLLLRIRK 88
Query: 231 K----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSAPPQCILEQ 395
+ K + G+E EV LG + IYKF+ + DFQYL V E G + ++
Sbjct: 89 RTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK--HTSMYDK 146
Query: 396 IMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 503
++ + F + P +I P FSR D P++ Y
Sbjct: 147 VLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 182
>BC017337-1|AAH17337.1| 519|Homo sapiens general transcription
factor IIIC, polypeptide 5, 63kDa protein.
Length = 519
Score = 64.1 bits (149), Expect = 4e-10
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Frame = +3
Query: 51 LVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLXKKIYGDCVNTAGVLLKVKV 230
+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+ +LL+++
Sbjct: 32 VVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTSSLLLRIRK 90
Query: 231 K----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSAPPQCILEQ 395
+ K + G+E EV LG + IYKF+ + DFQYL V E G + ++
Sbjct: 91 RTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK--HTSMYDK 148
Query: 396 IMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 503
++ + F + P +I P FSR D P++ Y
Sbjct: 149 VLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 184
>BC011355-1|AAH11355.1| 519|Homo sapiens GTF3C5 protein protein.
Length = 519
Score = 64.1 bits (149), Expect = 4e-10
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Frame = +3
Query: 51 LVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLXKKIYGDCVNTAGVLLKVKV 230
+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+ +LL+++
Sbjct: 32 VVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTSSLLLRIRK 90
Query: 231 K----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSAPPQCILEQ 395
+ K + G+E EV LG + IYKF+ + DFQYL V E G + ++
Sbjct: 91 RTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK--HTSMYDK 148
Query: 396 IMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 503
++ + F + P +I P FSR D P++ Y
Sbjct: 149 VLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 184
>AY007123-1|AAG01991.1| 519|Homo sapiens protein ( Homo sapiens
clone CDABP0017 mRNA sequence. ).
Length = 519
Score = 64.1 bits (149), Expect = 4e-10
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Frame = +3
Query: 51 LVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLXKKIYGDCVNTAGVLLKVKV 230
+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+ +LL+++
Sbjct: 32 VVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTSSLLLRIRK 90
Query: 231 K----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSAPPQCILEQ 395
+ K + G+E EV LG + IYKF+ + DFQYL V E G + ++
Sbjct: 91 RTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK--HTSMYDK 148
Query: 396 IMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 503
++ + F + P +I P FSR D P++ Y
Sbjct: 149 VLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 184
>AL162417-4|CAI13408.1| 457|Homo sapiens general transcription
factor IIIC, polypeptide 5,ansporting, mitochondrial F1
c protein.
Length = 457
Score = 64.1 bits (149), Expect = 4e-10
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Frame = +3
Query: 51 LVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLXKKIYGDCVNTAGVLLKVKV 230
+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+ +LL+++
Sbjct: 32 VVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTSSLLLRIRK 90
Query: 231 K----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSAPPQCILEQ 395
+ K + G+E EV LG + IYKF+ + DFQYL V E G + ++
Sbjct: 91 RTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK--HTSMYDK 148
Query: 396 IMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 503
++ + F + P +I P FSR D P++ Y
Sbjct: 149 VLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 184
>AL162417-3|CAI13407.1| 526|Homo sapiens general transcription
factor IIIC, polypeptide 5,eroid dehydrogenase-like
(HSPC protein.
Length = 526
Score = 64.1 bits (149), Expect = 4e-10
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Frame = +3
Query: 51 LVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLXKKIYGDCVNTAGVLLKVKV 230
+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+ +LL+++
Sbjct: 32 VVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTSSLLLRIRK 90
Query: 231 K----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSAPPQCILEQ 395
+ K + G+E EV LG + IYKF+ + DFQYL V E G + ++
Sbjct: 91 RTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK--HTSMYDK 148
Query: 396 IMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 503
++ + F + P +I P FSR D P++ Y
Sbjct: 149 VLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 184
>AL162417-2|CAI13406.1| 519|Homo sapiens general transcription
factor IIIC, polypeptide 5, protein.
Length = 519
Score = 64.1 bits (149), Expect = 4e-10
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Frame = +3
Query: 51 LVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLXKKIYGDCVNTAGVLLKVKV 230
+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+ +LL+++
Sbjct: 32 VVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTSSLLLRIRK 90
Query: 231 K----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSAPPQCILEQ 395
+ K + G+E EV LG + IYKF+ + DFQYL V E G + ++
Sbjct: 91 RTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK--HTSMYDK 148
Query: 396 IMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 503
++ + F + P +I P FSR D P++ Y
Sbjct: 149 VLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 184
>AF133124-1|AAD41476.1| 519|Homo sapiens transcription factor
IIIC63 protein.
Length = 519
Score = 64.1 bits (149), Expect = 4e-10
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Frame = +3
Query: 51 LVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLXKKIYGDCVNTAGVLLKVKV 230
+V++ K + LGG +S+ Y + K RL L ++P++ + + +T+ +LL+++
Sbjct: 32 VVRDVAKMLPTLGGEEGVSRIYADPTK-RLELYFRPKDPYCHPVCANRFSTSSLLLRIRK 90
Query: 231 K----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSAPPQCILEQ 395
+ K + G+E EV LG + IYKF+ + DFQYL V E G + ++
Sbjct: 91 RTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK--HTSMYDK 148
Query: 396 IMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 503
++ + F + P +I P FSR D P++ Y
Sbjct: 149 VLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 184
>AL162417-1|CAI13405.1| 244|Homo sapiens general transcription
factor IIIC, polypeptide 5,d protein-like family
protein.
Length = 244
Score = 56.4 bits (130), Expect = 8e-08
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Frame = +3
Query: 132 KRLGLSYQPQNKLXKKIYGDCVNTAGVLLKVKVK----KTINGSEVKREV-ISTTPLGQV 296
KRL L ++P++ + + +T+ +LL+++ + K + G+E EV LG +
Sbjct: 11 KRLELYFRPKDPYCHPVCANRFSTSSLLLRIRKRTRRQKGVLGTEAHSEVTFDMEILGII 70
Query: 297 RKIYKFESLCDFQYLPVSKEGAGSAPPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSR 476
IYKF+ + DFQYL V E G + ++++ + F + P +I P FSR
Sbjct: 71 STIYKFQGMSDFQYLAVHTEAGGK--HTSMYDKVLMLRPEKEAFFHQELPLYIPPPIFSR 128
Query: 477 FDKPLNLDY 503
D P++ Y
Sbjct: 129 LDAPVDYFY 137
>AK097295-1|BAC04993.1| 509|Homo sapiens protein ( Homo sapiens
cDNA FLJ39976 fis, clone SPLEN2028994, highly similar to
Homo sapiens transcription factor IIIC63 mRNA. ).
Length = 509
Score = 50.0 bits (114), Expect = 7e-06
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Frame = +3
Query: 51 LVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLXKKIYGDCVNTAGVLLKVKV 230
+V++ K + LGG +S+ Y + P++ + + +T+ +LL+++
Sbjct: 32 VVRDVAKMLPTLGGEEGVSRIYAD-----------PKDPYCHPVCANRFSTSSLLLRIRK 80
Query: 231 K----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSAPPQCILEQ 395
+ K + G+E EV LG + IYKF+ + DFQYL V E G + ++
Sbjct: 81 RTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAGGK--HTSMYDK 138
Query: 396 IMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 503
++ + F + P +I P FSR D P++ Y
Sbjct: 139 VLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 174
>BC009741-1|AAH09741.2| 449|Homo sapiens GTF3C5 protein protein.
Length = 449
Score = 48.8 bits (111), Expect = 2e-05
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Frame = +3
Query: 198 NTAGVLLKVKVK----KTINGSEVKREV-ISTTPLGQVRKIYKFESLCDFQYLPVSKEGA 362
+T+ +LL+++ + K + G+E EV LG + IYKF+ + DFQYL V E
Sbjct: 10 STSSLLLRIRKRTRRQKGVLGTEAHSEVTFDMEILGIISTIYKFQGMSDFQYLAVHTEAG 69
Query: 363 GSAPPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDY 503
G + ++++ + F + P +I P FSR D P++ Y
Sbjct: 70 GK--HTSMYDKVLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYFY 114
>AL162417-5|CAI13409.1| 224|Homo sapiens general transcription
factor IIIC, polypeptide 5,r RAS oncogene family)
protein.
Length = 224
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 321 LCDFQYLPVSKEGAGSAPPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLD 500
+ DFQYL V E G + ++++ + F + P +I P FSR D P++
Sbjct: 1 MSDFQYLAVHTEAGGKHTS--MYDKVLMLRPEKEAFFHQELPLYIPPPIFSRLDAPVDYF 58
Query: 501 Y 503
Y
Sbjct: 59 Y 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,160,222
Number of Sequences: 237096
Number of extensions: 1871751
Number of successful extensions: 4283
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4267
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -