Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_G22
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35603-3|CAA84675.1|  433|Caenorhabditis elegans Hypothetical pr...    73   2e-13
U64845-2|AAC48031.2|  980|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z54237-8|CAE52902.1|  771|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z54235-10|CAE52905.1|  771|Caenorhabditis elegans Hypothetical p...    29   3.8  
U00049-2|AAC47052.2|  327|Caenorhabditis elegans Serpentine rece...    28   6.7  
U40029-11|AAA81130.1|  914|Caenorhabditis elegans Tudor staphylo...    27   8.9  

>Z35603-3|CAA84675.1|  433|Caenorhabditis elegans Hypothetical
           protein T02C12.3 protein.
          Length = 433

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 10/209 (4%)
 Frame = +3

Query: 51  LVKNEDKAIECLGGIRQLSQAYTELNKKRLGLSYQPQNKLXKKIYG-----DCVNTAGVL 215
           +VKN DKA++ +GG++ +SQ++   N   L LS+ P N    +I       D V++  + 
Sbjct: 26  IVKNVDKALQTMGGLQLISQSH--FNNHSLELSHTPDNPYTSRIMAERKPQDNVSSGTLH 83

Query: 216 LKVKVKKTINGSEVKREVISTTPLGQVRKIYKFESLCDFQYLPVSKEGAGSAPPQCILEQ 395
           L +KV++     ++    I T+ LG V  +Y F+ +CDFQYLP+ K   G    + ++ +
Sbjct: 84  LVMKVRR----KKIDPTKIKTSFLGLVNTVYTFDVMCDFQYLPLKKR-VGCDTFEDLIPK 138

Query: 396 IMPSGVDTLQFLTEPG-----PQFIIPSSFSRFDKPLNLDYIEXXSILQKNTSLGQDDDI 560
           ++P+ + +     +       P F+ P  FSR+  P +   +   +   + T   Q    
Sbjct: 139 LIPTDIASALSWWDASESVATPLFLPPYQFSRYLTP-STKILGRETDHTEKTKNAQKKGY 197

Query: 561 HRKRRLERGGQPTGLKFSLTEEFPKEPHE 647
            +  R+ER  +   +  +  EEFP EP +
Sbjct: 198 GQNLRVER--KALSVTVNAKEEFPLEPSQ 224


>U64845-2|AAC48031.2|  980|Caenorhabditis elegans Hypothetical
           protein F45F2.10 protein.
          Length = 980

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +3

Query: 411 VDTLQFLTEPGPQFIIPSSFSRFD--KPLNLDYIEXXSILQKNTSLGQDDDIHRKRRLER 584
           ++  +F  EP   F+IP  ++RFD   P N  +I    ++    +  +      K+R+  
Sbjct: 690 IERSEFEEEPVVLFLIPCQYNRFDTTMPANFPHIVRVPMVTDALATAERIAAKEKKRIAS 749

Query: 585 GG 590
           GG
Sbjct: 750 GG 751


>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
            T11B7.4d protein.
          Length = 1424

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 27/130 (20%), Positives = 55/130 (42%), Gaps = 2/130 (1%)
 Frame = +3

Query: 153  QPQNKLXKKIYGDCVNTAGVLLKVKVKKTINGSEVKREVISTTPLGQVRKIYKFES--LC 326
            Q Q +L   +    V    +  ++++ + I+      E +   P    +++ +     L 
Sbjct: 1028 QTQTQLSTLLESAIVYLQNLRPELELTEPIDNDAKSLETVKFEPTRAEQRVNEIRKKVLE 1087

Query: 327  DFQYLPVSKEGAGSAPPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDYI 506
            D ++LP+  +G  S PP     ++ P      Q      PQF +P++ S   + L+ D +
Sbjct: 1088 DLEHLPILGDGMDSVPPPPPERKVFP-----FQSYQPIAPQFPVPAAESPVTQSLH-DVL 1141

Query: 507  EXXSILQKNT 536
            +    L+K T
Sbjct: 1142 DEFYSLRKPT 1151


>Z54237-8|CAE52902.1|  771|Caenorhabditis elegans Hypothetical
           protein T11B7.4c protein.
          Length = 771

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 27/130 (20%), Positives = 55/130 (42%), Gaps = 2/130 (1%)
 Frame = +3

Query: 153 QPQNKLXKKIYGDCVNTAGVLLKVKVKKTINGSEVKREVISTTPLGQVRKIYKFES--LC 326
           Q Q +L   +    V    +  ++++ + I+      E +   P    +++ +     L 
Sbjct: 375 QTQTQLSTLLESAIVYLQNLRPELELTEPIDNDAKSLETVKFEPTRAEQRVNEIRKKVLE 434

Query: 327 DFQYLPVSKEGAGSAPPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDYI 506
           D ++LP+  +G  S PP     ++ P      Q      PQF +P++ S   + L+ D +
Sbjct: 435 DLEHLPILGDGMDSVPPPPPERKVFP-----FQSYQPIAPQFPVPAAESPVTQSLH-DVL 488

Query: 507 EXXSILQKNT 536
           +    L+K T
Sbjct: 489 DEFYSLRKPT 498


>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
            protein T11B7.4d protein.
          Length = 1424

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 27/130 (20%), Positives = 55/130 (42%), Gaps = 2/130 (1%)
 Frame = +3

Query: 153  QPQNKLXKKIYGDCVNTAGVLLKVKVKKTINGSEVKREVISTTPLGQVRKIYKFES--LC 326
            Q Q +L   +    V    +  ++++ + I+      E +   P    +++ +     L 
Sbjct: 1028 QTQTQLSTLLESAIVYLQNLRPELELTEPIDNDAKSLETVKFEPTRAEQRVNEIRKKVLE 1087

Query: 327  DFQYLPVSKEGAGSAPPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDYI 506
            D ++LP+  +G  S PP     ++ P      Q      PQF +P++ S   + L+ D +
Sbjct: 1088 DLEHLPILGDGMDSVPPPPPERKVFP-----FQSYQPIAPQFPVPAAESPVTQSLH-DVL 1141

Query: 507  EXXSILQKNT 536
            +    L+K T
Sbjct: 1142 DEFYSLRKPT 1151


>Z54235-10|CAE52905.1|  771|Caenorhabditis elegans Hypothetical
           protein T11B7.4c protein.
          Length = 771

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 27/130 (20%), Positives = 55/130 (42%), Gaps = 2/130 (1%)
 Frame = +3

Query: 153 QPQNKLXKKIYGDCVNTAGVLLKVKVKKTINGSEVKREVISTTPLGQVRKIYKFES--LC 326
           Q Q +L   +    V    +  ++++ + I+      E +   P    +++ +     L 
Sbjct: 375 QTQTQLSTLLESAIVYLQNLRPELELTEPIDNDAKSLETVKFEPTRAEQRVNEIRKKVLE 434

Query: 327 DFQYLPVSKEGAGSAPPQCILEQIMPSGVDTLQFLTEPGPQFIIPSSFSRFDKPLNLDYI 506
           D ++LP+  +G  S PP     ++ P      Q      PQF +P++ S   + L+ D +
Sbjct: 435 DLEHLPILGDGMDSVPPPPPERKVFP-----FQSYQPIAPQFPVPAAESPVTQSLH-DVL 488

Query: 507 EXXSILQKNT 536
           +    L+K T
Sbjct: 489 DEFYSLRKPT 498


>U00049-2|AAC47052.2|  327|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 2 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 273 STTPLGQVRKIYKFESLCDFQYLPVSK 353
           ST PL  + K+  FE  CD  Y P+++
Sbjct: 4   STAPLSIITKLALFERTCDSSYSPLAE 30


>U40029-11|AAA81130.1|  914|Caenorhabditis elegans Tudor
           staphylococcal nuclease homologprotein 1 protein.
          Length = 914

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
 Frame = +3

Query: 81  CLGGIRQLSQAYTELNKKRLGL--SYQPQNKL----XKKIYGDCVNTAGVLLKVKVKKTI 242
           C GG ++L  A  +  +KRL L  SYQP +       K   G  V    VL    V +  
Sbjct: 304 CTGGAQKLRDAERQAKEKRLRLWKSYQPTSSAYSGDRKAFTGKVVEI--VLSDAVVVQKD 361

Query: 243 NGSEVKREVIS 275
           +GSEVK  + S
Sbjct: 362 DGSEVKLHLSS 372


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,109,521
Number of Sequences: 27780
Number of extensions: 313907
Number of successful extensions: 676
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)