Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_G20
(625 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 110 4e-24
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 110 4e-24
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 110 4e-24
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 110 4e-24
BC019609-1|AAH19609.1| 260|Homo sapiens Unknown (protein for IM... 110 4e-24
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 110 4e-24
BC015218-1|AAH15218.2| 260|Homo sapiens FBL protein protein. 110 4e-24
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 110 4e-24
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 110 4e-24
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 108 1e-23
>X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 110 bits (264), Expect = 4e-24
Identities = 49/74 (66%), Positives = 56/74 (75%)
Frame = +1
Query: 397 VIIEPHRHPGVFIXRGKXXALVTKNLVPXSXVYGEXXISLDNERDKVEYXVWNPFXSKLA 576
V++EPHRH GVFI RGK ALVTKNLVP VYGE +S+ DK+EY WNPF SKLA
Sbjct: 86 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145
Query: 577 AAIMGGVDAIHMAP 618
AAI+GGVD IH+ P
Sbjct: 146 AAILGGVDQIHIKP 159
>CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein.
Length = 321
Score = 110 bits (264), Expect = 4e-24
Identities = 49/74 (66%), Positives = 56/74 (75%)
Frame = +1
Query: 397 VIIEPHRHPGVFIXRGKXXALVTKNLVPXSXVYGEXXISLDNERDKVEYXVWNPFXSKLA 576
V++EPHRH GVFI RGK ALVTKNLVP VYGE +S+ DK+EY WNPF SKLA
Sbjct: 86 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145
Query: 577 AAIMGGVDAIHMAP 618
AAI+GGVD IH+ P
Sbjct: 146 AAILGGVDQIHIKP 159
>BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 110 bits (264), Expect = 4e-24
Identities = 49/74 (66%), Positives = 56/74 (75%)
Frame = +1
Query: 397 VIIEPHRHPGVFIXRGKXXALVTKNLVPXSXVYGEXXISLDNERDKVEYXVWNPFXSKLA 576
V++EPHRH GVFI RGK ALVTKNLVP VYGE +S+ DK+EY WNPF SKLA
Sbjct: 86 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145
Query: 577 AAIMGGVDAIHMAP 618
AAI+GGVD IH+ P
Sbjct: 146 AAILGGVDQIHIKP 159
>BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 110 bits (264), Expect = 4e-24
Identities = 49/74 (66%), Positives = 56/74 (75%)
Frame = +1
Query: 397 VIIEPHRHPGVFIXRGKXXALVTKNLVPXSXVYGEXXISLDNERDKVEYXVWNPFXSKLA 576
V++EPHRH GVFI RGK ALVTKNLVP VYGE +S+ DK+EY WNPF SKLA
Sbjct: 86 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145
Query: 577 AAIMGGVDAIHMAP 618
AAI+GGVD IH+ P
Sbjct: 146 AAILGGVDQIHIKP 159
>BC019609-1|AAH19609.1| 260|Homo sapiens Unknown (protein for
IMAGE:4538098) protein.
Length = 260
Score = 110 bits (264), Expect = 4e-24
Identities = 49/74 (66%), Positives = 56/74 (75%)
Frame = +1
Query: 397 VIIEPHRHPGVFIXRGKXXALVTKNLVPXSXVYGEXXISLDNERDKVEYXVWNPFXSKLA 576
V++EPHRH GVFI RGK ALVTKNLVP VYGE +S+ DK+EY WNPF SKLA
Sbjct: 25 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 84
Query: 577 AAIMGGVDAIHMAP 618
AAI+GGVD IH+ P
Sbjct: 85 AAILGGVDQIHIKP 98
>BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 110 bits (264), Expect = 4e-24
Identities = 49/74 (66%), Positives = 56/74 (75%)
Frame = +1
Query: 397 VIIEPHRHPGVFIXRGKXXALVTKNLVPXSXVYGEXXISLDNERDKVEYXVWNPFXSKLA 576
V++EPHRH GVFI RGK ALVTKNLVP VYGE +S+ DK+EY WNPF SKLA
Sbjct: 86 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145
Query: 577 AAIMGGVDAIHMAP 618
AAI+GGVD IH+ P
Sbjct: 146 AAILGGVDQIHIKP 159
>BC015218-1|AAH15218.2| 260|Homo sapiens FBL protein protein.
Length = 260
Score = 110 bits (264), Expect = 4e-24
Identities = 49/74 (66%), Positives = 56/74 (75%)
Frame = +1
Query: 397 VIIEPHRHPGVFIXRGKXXALVTKNLVPXSXVYGEXXISLDNERDKVEYXVWNPFXSKLA 576
V++EPHRH GVFI RGK ALVTKNLVP VYGE +S+ DK+EY WNPF SKLA
Sbjct: 25 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 84
Query: 577 AAIMGGVDAIHMAP 618
AAI+GGVD IH+ P
Sbjct: 85 AAILGGVDQIHIKP 98
>AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227]
protein.
Length = 227
Score = 110 bits (264), Expect = 4e-24
Identities = 49/74 (66%), Positives = 56/74 (75%)
Frame = +1
Query: 397 VIIEPHRHPGVFIXRGKXXALVTKNLVPXSXVYGEXXISLDNERDKVEYXVWNPFXSKLA 576
V++EPHRH GVFI RGK ALVTKNLVP VYGE +S+ DK+EY WNPF SKLA
Sbjct: 86 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145
Query: 577 AAIMGGVDAIHMAP 618
AAI+GGVD IH+ P
Sbjct: 146 AAILGGVDQIHIKP 159
>AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein.
Length = 318
Score = 110 bits (264), Expect = 4e-24
Identities = 49/74 (66%), Positives = 56/74 (75%)
Frame = +1
Query: 397 VIIEPHRHPGVFIXRGKXXALVTKNLVPXSXVYGEXXISLDNERDKVEYXVWNPFXSKLA 576
V++EPHRH GVFI RGK ALVTKNLVP VYGE +S+ DK+EY WNPF SKLA
Sbjct: 83 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 142
Query: 577 AAIMGGVDAIHMAP 618
AAI+GGVD IH+ P
Sbjct: 143 AAILGGVDQIHIKP 156
>M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 108 bits (260), Expect = 1e-23
Identities = 49/74 (66%), Positives = 55/74 (74%)
Frame = +1
Query: 397 VIIEPHRHPGVFIXRGKXXALVTKNLVPXSXVYGEXXISLDNERDKVEYXVWNPFXSKLA 576
V++EPHRH GVFI RGK ALVTKNLVP VYGE +S+ DK EY WNPF SKLA
Sbjct: 86 VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKFEYRAWNPFRSKLA 145
Query: 577 AAIMGGVDAIHMAP 618
AAI+GGVD IH+ P
Sbjct: 146 AAILGGVDQIHIKP 159
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,122,046
Number of Sequences: 237096
Number of extensions: 628154
Number of successful extensions: 744
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -