Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_G20
         (625 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA...   111   1e-24
BT001738-1|AAN71493.1|  331|Drosophila melanogaster RE72617p pro...   109   3e-24
BT023239-1|AAY55655.1|  349|Drosophila melanogaster IP10714p pro...    68   1e-11
AE014297-1590|AAF54870.1|  349|Drosophila melanogaster CG10909-P...    68   1e-11
X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin pr...    49   6e-06

>AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA
           protein.
          Length = 344

 Score =  111 bits (266), Expect = 1e-24
 Identities = 50/76 (65%), Positives = 58/76 (76%)
 Frame = +1

Query: 397 VIIEPHRHPGVFIXRGKXXALVTKNLVPXSXVYGEXXISLDNERDKVEYXVWNPFXSKLA 576
           V IEPHRH GVFI RGK  ALVT+N VP S VYGE  IS++   +K+EY VWNPF SKLA
Sbjct: 111 VTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVETNGEKIEYRVWNPFRSKLA 170

Query: 577 AAIMGGVDAIHMAPXS 624
           AA++GGV+ IHM P S
Sbjct: 171 AAVLGGVEQIHMPPGS 186


>BT001738-1|AAN71493.1|  331|Drosophila melanogaster RE72617p
           protein.
          Length = 331

 Score =  109 bits (262), Expect = 3e-24
 Identities = 50/76 (65%), Positives = 57/76 (75%)
 Frame = +1

Query: 397 VIIEPHRHPGVFIXRGKXXALVTKNLVPXSXVYGEXXISLDNERDKVEYXVWNPFXSKLA 576
           V IEPHRH GVFI RGK  ALVT N VP S VYGE  IS++   +K+EY VWNPF SKLA
Sbjct: 98  VTIEPHRHEGVFIARGKEDALVTGNFVPGSEVYGEKRISVETNGEKIEYRVWNPFRSKLA 157

Query: 577 AAIMGGVDAIHMAPXS 624
           AA++GGV+ IHM P S
Sbjct: 158 AAVLGGVEQIHMPPGS 173


>BT023239-1|AAY55655.1|  349|Drosophila melanogaster IP10714p
           protein.
          Length = 349

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = +1

Query: 403 IEPHRHPGVFIXRGKXXA--LVTKNLVPXSXVYGEXXISLDNERDKVEYXVWNPFXSKLA 576
           IEPHRH GV++ R +  A  L+T+N    +  YGE  +  +    + E+ VW+PF SKLA
Sbjct: 114 IEPHRHYGVYLLRNRFDAIQLLTRNTSSSADDYGERRVISEYREMRCEFRVWSPFQSKLA 173

Query: 577 AAIMGGVDAIHM 612
           A IMGGV  +H+
Sbjct: 174 AGIMGGVSDLHL 185


>AE014297-1590|AAF54870.1|  349|Drosophila melanogaster CG10909-PA
           protein.
          Length = 349

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = +1

Query: 403 IEPHRHPGVFIXRGKXXA--LVTKNLVPXSXVYGEXXISLDNERDKVEYXVWNPFXSKLA 576
           IEPHRH GV++ R +  A  L+T+N    +  YGE  +  +    + E+ VW+PF SKLA
Sbjct: 114 IEPHRHYGVYLLRNRFDAIQLLTRNTSSSADDYGERRVISEYREMRCEFRVWSPFQSKLA 173

Query: 577 AAIMGGVDAIHM 612
           A IMGGV  +H+
Sbjct: 174 AGIMGGVSDLHL 185


>X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin
           protein.
          Length = 147

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 22/30 (73%), Positives = 23/30 (76%)
 Frame = +1

Query: 397 VIIEPHRHPGVFIXRGKXXALVTKNLVPXS 486
           V IEPHRH GVFI RGK  ALVT+N VP S
Sbjct: 118 VTIEPHRHEGVFIARGKEDALVTRNFVPGS 147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,824,630
Number of Sequences: 53049
Number of extensions: 181249
Number of successful extensions: 276
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)