Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_G16
(581 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20 pro... 197 2e-50
BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20 p... 197 2e-50
BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20 p... 197 2e-50
AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20 p... 197 2e-50
AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20 p... 126 8e-29
D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein. 33 0.73
BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7 pro... 33 0.73
BC101386-1|AAI01387.1| 576|Homo sapiens PLEKHN1 protein protein. 32 1.7
AL645608-8|CAI15570.1| 611|Homo sapiens pleckstrin homology dom... 32 1.7
BC118982-1|AAI18983.1| 553|Homo sapiens KIAA2012 protein protein. 31 3.0
AB095932-1|BAC23108.1| 555|Homo sapiens KIAA2012 protein protein. 31 3.0
BC101387-1|AAI01388.1| 663|Homo sapiens PLEKHN1 protein protein. 30 5.2
>L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 197 bits (481), Expect = 2e-50
Identities = 97/116 (83%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
Frame = +2
Query: 200 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 376
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 377 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 544
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV VEVTIADA
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 197 bits (481), Expect = 2e-50
Identities = 97/116 (83%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
Frame = +2
Query: 200 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 376
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 377 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 544
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV VEVTIADA
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 197 bits (481), Expect = 2e-50
Identities = 97/116 (83%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
Frame = +2
Query: 200 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 376
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 377 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 544
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV VEVTIADA
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 197 bits (481), Expect = 2e-50
Identities = 97/116 (83%), Positives = 103/116 (88%), Gaps = 1/116 (0%)
Frame = +2
Query: 200 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 376
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 377 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 544
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV VEVTIADA
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20
protein.
Length = 60
Score = 126 bits (303), Expect = 8e-29
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +2
Query: 338 KGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 517
KGPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV
Sbjct: 1 KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGV 60
>D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein.
Length = 1088
Score = 33.1 bits (72), Expect = 0.73
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 100 TWRAV*NLEQIS*PKTSSANDVIVKRGSRC-SVRQRHRETPGRGL-PYPPHQDHSYFSQC 273
+W A ++ ++ S+ + V G R SV QRHR TP R + P +D SY +
Sbjct: 498 SWGAARPFAHLNHRESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEM 557
Query: 274 ALAREGL 294
A EGL
Sbjct: 558 LSAIEGL 564
>BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7
protein.
Length = 1080
Score = 33.1 bits (72), Expect = 0.73
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 100 TWRAV*NLEQIS*PKTSSANDVIVKRGSRC-SVRQRHRETPGRGL-PYPPHQDHSYFSQC 273
+W A ++ ++ S+ + V G R SV QRHR TP R + P +D SY +
Sbjct: 490 SWGAARPFAHLNHRESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEM 549
Query: 274 ALAREGL 294
A EGL
Sbjct: 550 LSAIEGL 556
>BC101386-1|AAI01387.1| 576|Homo sapiens PLEKHN1 protein protein.
Length = 576
Score = 31.9 bits (69), Expect = 1.7
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 163 VIVKRGSRCS-VRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PNQWSQETEAACK 339
++ K+G+ S QRHR + G P PP S AREG P W T+
Sbjct: 484 LLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS--PEPWLPLTD---- 533
Query: 340 GPSPHANQDPAYHH 381
G SP ++DP Y H
Sbjct: 534 GRSPRRSRDPGYDH 547
>AL645608-8|CAI15570.1| 611|Homo sapiens pleckstrin homology domain
containing, family N member 1 protein.
Length = 611
Score = 31.9 bits (69), Expect = 1.7
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 163 VIVKRGSRCS-VRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PNQWSQETEAACK 339
++ K+G+ S QRHR + G P PP S AREG P W T+
Sbjct: 519 LLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS--PEPWLPLTD---- 568
Query: 340 GPSPHANQDPAYHH 381
G SP ++DP Y H
Sbjct: 569 GRSPRRSRDPGYDH 582
>BC118982-1|AAI18983.1| 553|Homo sapiens KIAA2012 protein protein.
Length = 553
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/57 (35%), Positives = 23/57 (40%)
Frame = +1
Query: 160 DVIVKRGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PNQWSQETEA 330
D++ K G V HR G G P Y S REG P +SQET A
Sbjct: 140 DIVQKVGRDYDVHHLHRGLLGYGPESPERLSAVYTSLLPREREGKAEPRLFSQETSA 196
>AB095932-1|BAC23108.1| 555|Homo sapiens KIAA2012 protein protein.
Length = 555
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/57 (35%), Positives = 23/57 (40%)
Frame = +1
Query: 160 DVIVKRGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PNQWSQETEA 330
D++ K G V HR G G P Y S REG P +SQET A
Sbjct: 142 DIVQKVGRDYDVHHLHRGLLGYGPESPERLSAVYTSLLPREREGKAEPRLFSQETSA 198
>BC101387-1|AAI01388.1| 663|Homo sapiens PLEKHN1 protein protein.
Length = 663
Score = 30.3 bits (65), Expect = 5.2
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 163 VIVKRGSRCS-VRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PNQWSQETEAACK 339
++ K+G+ S QRHR + G P PP S AREG P W T+
Sbjct: 571 LLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGSSEP--WLPLTD---- 620
Query: 340 GPSPHANQDPAYHH 381
G SP ++DP Y H
Sbjct: 621 GRSPRRSRDPGYDH 634
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,027,754
Number of Sequences: 237096
Number of extensions: 2014804
Number of successful extensions: 7549
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7548
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -