Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_G16
         (581 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal ...   204   7e-53
AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p pro...   204   7e-53
AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-P...   204   7e-53
AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p pro...   199   2e-51
X03431-1|CAA27159.1|  414|Drosophila melanogaster protein ( Dros...    31   0.86 
AY051538-1|AAK92962.1|  409|Drosophila melanogaster GH19029p pro...    28   8.0  
AE014134-2289|AAF53252.2|  409|Drosophila melanogaster CG5287-PA...    28   8.0  

>Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal
           protein protein.
          Length = 120

 Score =  204 bits (498), Expect = 7e-53
 Identities = 98/115 (85%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = +2

Query: 200 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 376
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 377 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 541
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV VEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p
           protein.
          Length = 120

 Score =  204 bits (498), Expect = 7e-53
 Identities = 98/115 (85%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = +2

Query: 200 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 376
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 377 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 541
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV VEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-PA
           protein.
          Length = 120

 Score =  204 bits (498), Expect = 7e-53
 Identities = 98/115 (85%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = +2

Query: 200 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 376
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 377 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 541
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV VEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p
           protein.
          Length = 120

 Score =  199 bits (486), Expect = 2e-51
 Identities = 96/115 (83%), Positives = 103/115 (89%), Gaps = 1/115 (0%)
 Frame = +2

Query: 200 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 376
           KDIEKP   + + +H IRITLTSRNVRSLE VC DLINGAK Q LRV+GPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMPTKTLRI 65

Query: 377 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 541
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV VEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>X03431-1|CAA27159.1|  414|Drosophila melanogaster protein (
           Drosophila melanogastertransposable element 297. ).
          Length = 414

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 66  KVVYLGRNSTSNMESRI-KFGTNIMTKNVFSQ*CYSKKRQP 185
           K  Y  +NS SN  S+  KF TN+ T+N  S   YS+  QP
Sbjct: 200 KPEYRNKNSNSNQNSKTQKFNTNVQTQNRPSYSQYSQPFQP 240


>AY051538-1|AAK92962.1|  409|Drosophila melanogaster GH19029p
           protein.
          Length = 409

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 200 CLTLQRLPLFTITSLAEDVFGHDICSK 120
           C+T++ +P F    +  ++FG+D+C K
Sbjct: 18  CMTVRMIPRFREMFIKANLFGNDLCKK 44


>AE014134-2289|AAF53252.2|  409|Drosophila melanogaster CG5287-PA
           protein.
          Length = 409

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 200 CLTLQRLPLFTITSLAEDVFGHDICSK 120
           C+T++ +P F    +  ++FG+D+C K
Sbjct: 18  CMTVRMIPRFREMFIKANLFGNDLCKK 44


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,194,277
Number of Sequences: 53049
Number of extensions: 587401
Number of successful extensions: 1938
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1938
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)