Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_G14
         (641 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.80 
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.4  
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.2  
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)        28   5.6  
SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06)        28   5.6  
SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06)          28   5.6  

>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 924

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 288 LQDGIKLLVQPENLKKVNVFEXNEXRNLSITLVMSCGFPF 407
           L+D  KL+ +P N+K  N         LS+T++   GFPF
Sbjct: 267 LEDVYKLMREPTNIKDPNAVAIIAPEALSLTILKDEGFPF 306


>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2208

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 441  EMMFQKITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHKHKK 596
            E + +KIT   L  IND   S+  L + +  K K  T  K K   ++ K KK
Sbjct: 948  ESLREKITGLELAAINDATASKEELESAVEEKAKAETKLKVKISALETKLKK 999



 Score = 28.7 bits (61), Expect = 4.2
 Identities = 16/71 (22%), Positives = 39/71 (54%)
 Frame = +3

Query: 408  KLKCXLSRVSDEMMFQKITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHK 587
            +L+  + ++SDE++ QK  +  LK+  +L  ++ +L +    +D+ +    +   ++ H 
Sbjct: 1975 ELQAKVKKLSDELVKQKSREERLKV--NLRKAKALLSSAKEARDETVQKCNSYSSKLSHV 2032

Query: 588  HKKTEPFNDEL 620
             KK   +ND++
Sbjct: 2033 SKK---YNDKI 2040


>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2520

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 24/109 (22%), Positives = 44/109 (40%)
 Frame = +3

Query: 216  TERTFLTQLKESNDGIXFENDSQLLQDGIKLLVQPENLKKVNVFEXNEXRNLSITLVMSC 395
            TERTF  +L E +  +  + D  + Q  + +    ENL++++  + +         +   
Sbjct: 903  TERTFQLKLLEKDQSVKDKMDELMQQKELGVQDVTENLERMHQEQISNLEERHRAEIAEQ 962

Query: 396  GFPFKLKCXLSRVSDEMMFQKITQNLLKIINDLWTSQTILRNTLNXKDK 542
               ++ K    R   E M +KI     +    L      LRN +  K+K
Sbjct: 963  NLEWEKKIASIRKESEEMMEKIIIESREKEEALVQDLDNLRNEIKQKEK 1011


>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
          Length = 1709

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 28/137 (20%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
 Frame = +3

Query: 234 TQLKESNDGIXFENDSQLLQDGIKLLVQPENLKKVNVFEXNEXRNLS--ITLVMSCGFPF 407
           ++L+E+N  +  + +S++ +  I L ++    +   VFE  +       ++LV     P+
Sbjct: 600 SELEETNRTLKEKYESEVSE--IMLQMEQVQQRNQEVFEAQQKEQFEKQLSLVKDELQPY 657

Query: 408 KLKCXLSRVSDEMMFQKITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHK 587
           K KC      ++ + +K  ++L ++ N +   +   + T N +++ +   KT   E+Q  
Sbjct: 658 KSKCQELEQENKELMEKYERDLSELKNKMDEVEERYKMTENIEEEGM---KTLEHELQIY 714

Query: 588 HKKTEPFNDELHMNTHN 638
             K +   D   M   N
Sbjct: 715 KAKVKELEDGNRMLVEN 731


>SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06)
          Length = 348

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 453 QKITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHKHK 593
           Q+I   L K  N++    + L + LN K + L  YK   GE+Q + K
Sbjct: 142 QRIRNELEKCKNEI----SDLNSKLNTKSQKLKTYKKHIGELQEREK 184


>SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06)
          Length = 364

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 453 QKITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHKHK 593
           Q+I   L K  N++    + L + LN K + L  YK   GE+Q + K
Sbjct: 142 QRIRNELEKCKNEI----SDLNSKLNTKSQKLKTYKKHIGELQEREK 184


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,603,499
Number of Sequences: 59808
Number of extensions: 296747
Number of successful extensions: 814
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)