Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_G14
(641 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457291-1|CAG33572.1| 299|Homo sapiens FLJ12610 protein. 31 2.6
BC030986-1|AAH30986.1| 299|Homo sapiens nonhomologous end-joini... 31 2.6
BC012732-1|AAH12732.1| 299|Homo sapiens nonhomologous end-joini... 31 2.6
AK022672-1|BAB14168.1| 299|Homo sapiens protein ( Homo sapiens ... 31 2.6
AJ972687-1|CAI99410.1| 299|Homo sapiens Cernunnos protein protein. 31 2.6
AL137068-7|CAD20123.1| 1007|Homo sapiens centrosomal protein 110... 30 6.1
AL137068-5|CAI12358.1| 1773|Homo sapiens centrosomal protein 110... 30 6.1
AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110... 30 6.1
AK074079-1|BAB84905.1| 1793|Homo sapiens FLJ00150 protein protein. 30 6.1
AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein. 30 6.1
AF083322-1|AAC32373.1| 994|Homo sapiens centriole associated pr... 30 6.1
>CR457291-1|CAG33572.1| 299|Homo sapiens FLJ12610 protein.
Length = 299
Score = 31.5 bits (68), Expect = 2.6
Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 4/173 (2%)
Frame = +3
Query: 108 WKLLQESPTAYAIQFNKENGYEIFITDFIYLWHVYFTERTFLTQLKESNDGIXFENDSQL 287
W L E+ + K+ GY + ++D +WH + KE N + + L
Sbjct: 15 WLQLAENSLLAKVFITKQ-GYALLVSDLQQVWHEQVDTSVVSQRAKELNKRLTAPPAAFL 73
Query: 288 --LQDGIKLLVQPENLKKVNVFEXNEXRNLSITLVMS--CGFPFKLKCXLSRVSDEMMFQ 455
L + ++ L++ F + + I V S G PF S ++ Q
Sbjct: 74 CHLDNLLRPLLKDAAHPSEATFSCDCVADALILRVRSELSGLPFYWNFHCMLASPSLVSQ 133
Query: 456 KITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHKHKKTEPFND 614
+ + L+ + L L L+ KD + Y+ + KTEPF +
Sbjct: 134 HLIRPLMGMSLALQCQVRELATLLHMKDLEIQDYQESGATLIRDRLKTEPFEE 186
>BC030986-1|AAH30986.1| 299|Homo sapiens nonhomologous end-joining
factor 1 protein.
Length = 299
Score = 31.5 bits (68), Expect = 2.6
Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 4/173 (2%)
Frame = +3
Query: 108 WKLLQESPTAYAIQFNKENGYEIFITDFIYLWHVYFTERTFLTQLKESNDGIXFENDSQL 287
W L E+ + K+ GY + ++D +WH + KE N + + L
Sbjct: 15 WLQLAENSLLAKVFITKQ-GYALLVSDLQQVWHEQVDTSVVSQRAKELNKRLTAPPAAFL 73
Query: 288 --LQDGIKLLVQPENLKKVNVFEXNEXRNLSITLVMS--CGFPFKLKCXLSRVSDEMMFQ 455
L + ++ L++ F + + I V S G PF S ++ Q
Sbjct: 74 CHLDNLLRPLLKDAAHPSEATFSCDCVADALILRVRSELSGLPFYWNFHCMLASPSLVSQ 133
Query: 456 KITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHKHKKTEPFND 614
+ + L+ + L L L+ KD + Y+ + KTEPF +
Sbjct: 134 HLIRPLMGMSLALQCQVRELATLLHMKDLEIQDYQESGATLIRDRLKTEPFEE 186
>BC012732-1|AAH12732.1| 299|Homo sapiens nonhomologous end-joining
factor 1 protein.
Length = 299
Score = 31.5 bits (68), Expect = 2.6
Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 4/173 (2%)
Frame = +3
Query: 108 WKLLQESPTAYAIQFNKENGYEIFITDFIYLWHVYFTERTFLTQLKESNDGIXFENDSQL 287
W L E+ + K+ GY + ++D +WH + KE N + + L
Sbjct: 15 WLQLAENSLLAKVFITKQ-GYALLVSDLQQVWHEQVDTSVVSQRAKELNKRLTAPPAAFL 73
Query: 288 --LQDGIKLLVQPENLKKVNVFEXNEXRNLSITLVMS--CGFPFKLKCXLSRVSDEMMFQ 455
L + ++ L++ F + + I V S G PF S ++ Q
Sbjct: 74 CHLDNLLRPLLKDAAHPSEATFSCDCVADALILRVRSELSGLPFYWNFHCMLASPSLVSQ 133
Query: 456 KITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHKHKKTEPFND 614
+ + L+ + L L L+ KD + Y+ + KTEPF +
Sbjct: 134 HLIRPLMGMSLALQCQVRELATLLHMKDLEIQDYQESGATLIRDRLKTEPFEE 186
>AK022672-1|BAB14168.1| 299|Homo sapiens protein ( Homo sapiens
cDNA FLJ12610 fis, clone NT2RM4001565. ).
Length = 299
Score = 31.5 bits (68), Expect = 2.6
Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 4/173 (2%)
Frame = +3
Query: 108 WKLLQESPTAYAIQFNKENGYEIFITDFIYLWHVYFTERTFLTQLKESNDGIXFENDSQL 287
W L E+ + K+ GY + ++D +WH + KE N + + L
Sbjct: 15 WLQLAENSLLAKVFITKQ-GYALLVSDLQQVWHEQVDTSVVSQRAKELNKRLTAPPAAFL 73
Query: 288 --LQDGIKLLVQPENLKKVNVFEXNEXRNLSITLVMS--CGFPFKLKCXLSRVSDEMMFQ 455
L + ++ L++ F + + I V S G PF S ++ Q
Sbjct: 74 CHLDNLLRPLLKDAAHPSEATFSCDCVADALILRVRSELSGLPFYWNFHCMLASPSLVSQ 133
Query: 456 KITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHKHKKTEPFND 614
+ + L+ + L L L+ KD + Y+ + KTEPF +
Sbjct: 134 HLIRPLMGMSLALQCQVRELATLLHMKDLEIQDYQESGATLIRDRLKTEPFEE 186
>AJ972687-1|CAI99410.1| 299|Homo sapiens Cernunnos protein protein.
Length = 299
Score = 31.5 bits (68), Expect = 2.6
Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 4/173 (2%)
Frame = +3
Query: 108 WKLLQESPTAYAIQFNKENGYEIFITDFIYLWHVYFTERTFLTQLKESNDGIXFENDSQL 287
W L E+ + K+ GY + ++D +WH + KE N + + L
Sbjct: 15 WLQLAENSLLAKVFITKQ-GYALLVSDLQQVWHEQVDTSVVSQRAKELNKRLTAPPAAFL 73
Query: 288 --LQDGIKLLVQPENLKKVNVFEXNEXRNLSITLVMS--CGFPFKLKCXLSRVSDEMMFQ 455
L + ++ L++ F + + I V S G PF S ++ Q
Sbjct: 74 CHLDNLLRPLLKDAAHPSEATFSCDCVADALILRVRSELSGLPFYWNFHCMLASPSLVSQ 133
Query: 456 KITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHKHKKTEPFND 614
+ + L+ + L L L+ KD + Y+ + KTEPF +
Sbjct: 134 HLIRPLMGMSLALQCQVRELATLLHMKDLEIQDYQESGATLIRDRLKTEPFEE 186
>AL137068-7|CAD20123.1| 1007|Homo sapiens centrosomal protein 110kDa
protein.
Length = 1007
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 423 LSRVSDEMMFQKITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHK 587
L V EMMFQ++ + + L TS+ L+ + +K LT K+K ++ K
Sbjct: 623 LKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLEKELTDQKSKLDQVLSK 677
>AL137068-5|CAI12358.1| 1773|Homo sapiens centrosomal protein 110kDa
protein.
Length = 1773
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 423 LSRVSDEMMFQKITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHK 587
L V EMMFQ++ + + L TS+ L+ + +K LT K+K ++ K
Sbjct: 1389 LKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLEKELTDQKSKLDQVLSK 1443
>AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110kDa
protein.
Length = 2325
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 423 LSRVSDEMMFQKITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHK 587
L V EMMFQ++ + + L TS+ L+ + +K LT K+K ++ K
Sbjct: 1941 LKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLEKELTDQKSKLDQVLSK 1995
>AK074079-1|BAB84905.1| 1793|Homo sapiens FLJ00150 protein protein.
Length = 1793
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 423 LSRVSDEMMFQKITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHK 587
L V EMMFQ++ + + L TS+ L+ + +K LT K+K ++ K
Sbjct: 1409 LKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLEKELTDQKSKLDQVLSK 1463
>AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein.
Length = 2325
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 423 LSRVSDEMMFQKITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHK 587
L V EMMFQ++ + + L TS+ L+ + +K LT K+K ++ K
Sbjct: 1941 LKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLEKELTDQKSKLDQVLSK 1995
>AF083322-1|AAC32373.1| 994|Homo sapiens centriole associated
protein CEP110 protein.
Length = 994
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 423 LSRVSDEMMFQKITQNLLKIINDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQHK 587
L V EMMFQ++ + + L TS+ L+ + +K LT K+K ++ K
Sbjct: 610 LKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLEKELTDQKSKLDQVLSK 664
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,433,345
Number of Sequences: 237096
Number of extensions: 1431090
Number of successful extensions: 2147
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2142
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -