Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_G14
         (641 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016438-3|AAQ62456.1|  173|Caenorhabditis elegans Hypothetical ...    29   2.1  
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a...    29   3.7  
Z81050-5|CAB02855.2|  367|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z81070-7|CAD30437.1|  608|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z81070-6|CAB03000.1|  677|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>AF016438-3|AAQ62456.1|  173|Caenorhabditis elegans Hypothetical
           protein F44C8.9b protein.
          Length = 173

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 571 PNFVLYAVSXLSXLFKVFLNIV*LVHRSLIIFSRF*VIFWN 449
           P F++      +  FK  +++  LVH++  IF    VIFW+
Sbjct: 114 PEFIISFEPEKASPFKTVIDVTDLVHKAAEIFQEVKVIFWH 154


>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 168 protein.
          Length = 1347

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 422 TFQSIR*NDVPKNYSKPTENNQ*SVDESNNIKEHLEQ 532
           T Q I+ N+ P+N+ K +  N   V ESN +   LE+
Sbjct: 159 TVQEIKNNETPRNFFKTSIINNLEVSESNFLNFELEK 195


>Z81050-5|CAB02855.2|  367|Caenorhabditis elegans Hypothetical
           protein C50B6.6 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -2

Query: 541 LSXLFKVFLNIV*LVHRSLIIFSRF*VIFWNIISSDTLESXHFN 410
           +S L + +L ++ L+H  L I   F   F + IS DTL     N
Sbjct: 101 ISGLIQFYLLVICLIHTGLSILEMFKYRFNSTISDDTLNKKVLN 144


>Z81070-7|CAD30437.1|  608|Caenorhabditis elegans Hypothetical
           protein F26E4.7b protein.
          Length = 608

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 486 NDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQH 584
           N LW  QT++R+T+N     +T ++   G   +
Sbjct: 92  NKLWDKQTLIRSTINSGYTYITQFENNPGNFSY 124


>Z81070-6|CAB03000.1|  677|Caenorhabditis elegans Hypothetical
           protein F26E4.7a protein.
          Length = 677

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 486 NDLWTSQTILRNTLNXKDKXLTAYKTKFGEIQH 584
           N LW  QT++R+T+N     +T ++   G   +
Sbjct: 92  NKLWDKQTLIRSTINSGYTYITQFENNPGNFSY 124


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,090,276
Number of Sequences: 27780
Number of extensions: 250990
Number of successful extensions: 673
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)