Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_G10
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   3.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   4.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   6.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 254 TDIDAFQGFGEQTWPIWLYIYSRRFQDGGNFLTS*RQHHHP 132
           TD+D F+G     WP+ L   +R  +  GN L   +Q  +P
Sbjct: 515 TDLDDFKGVCGMKWPL-LSTINRHLR--GNELLPMQQSQNP 552


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 105 MCLLCSHPGWMMMLPLTGE 161
           + L+C   GWM + P++ E
Sbjct: 6   LSLICKFGGWMGLTPVSVE 24


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 42  ELRPTATCTFKTKNGVKS*ISMCLLCSHPGWMMMLP 149
           E+RP A C  + KN +   I   +L   P   + LP
Sbjct: 462 EIRPDAICVSQLKNALS--IDKGILREKPDVKIFLP 495


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 159 EKISTILKAAAVDVEPYWPGLFAKAL 236
           EKI  +L+       P  PG FAK L
Sbjct: 340 EKIYGVLEEYTRTTHPNEPGRFAKLL 365


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/36 (22%), Positives = 17/36 (47%)
 Frame = -1

Query: 289 APTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAA 182
           +P P+P + +       +  L   PG   +++T+ A
Sbjct: 79  SPEPDPEIPVAPEPAPLASPLVQEPGSSTTSATSGA 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,878
Number of Sequences: 336
Number of extensions: 1768
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)