Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_G10
         (502 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic ri...    71   3e-12
CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.                71   3e-12
BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, larg...    71   3e-12
BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, larg...    71   3e-12
AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal phosph...    71   3e-12
AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1 pr...    71   3e-12
CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.                69   1e-11
EF560746-1|ABQ59056.1|  979|Homo sapiens KIAA1394 protein protein.     30   5.2  

>M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic
           ribosomal phosphoprotein P1 mRNA, complete cds. ).
          Length = 114

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 31/52 (59%), Positives = 42/52 (80%)
 Frame = +3

Query: 150 LTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 305
           +T +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI N+G+G G APAAG
Sbjct: 23  VTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG-GPAPAAG 73


>CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 31/52 (59%), Positives = 42/52 (80%)
 Frame = +3

Query: 150 LTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 305
           +T +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI N+G+G G APAAG
Sbjct: 23  VTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG-GPAPAAG 73


>BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 31/52 (59%), Positives = 42/52 (80%)
 Frame = +3

Query: 150 LTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 305
           +T +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI N+G+G G APAAG
Sbjct: 23  VTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG-GPAPAAG 73


>BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 31/52 (59%), Positives = 42/52 (80%)
 Frame = +3

Query: 150 LTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 305
           +T +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI N+G+G G APAAG
Sbjct: 23  VTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG-GPAPAAG 73


>AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal
           phosphoprotein P1 protein.
          Length = 113

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 31/52 (59%), Positives = 42/52 (80%)
 Frame = +3

Query: 150 LTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 305
           +T +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI N+G+G G APAAG
Sbjct: 23  VTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG-GPAPAAG 73


>AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1
           protein.
          Length = 114

 Score = 70.5 bits (165), Expect = 3e-12
 Identities = 31/52 (59%), Positives = 42/52 (80%)
 Frame = +3

Query: 150 LTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 305
           +T +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI N+G+G G APAAG
Sbjct: 23  VTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG-GPAPAAG 73


>CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 68.5 bits (160), Expect = 1e-11
 Identities = 30/52 (57%), Positives = 42/52 (80%)
 Frame = +3

Query: 150 LTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 305
           +T +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI ++G+G G APAAG
Sbjct: 23  VTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICDVGAG-GPAPAAG 73


>EF560746-1|ABQ59056.1|  979|Homo sapiens KIAA1394 protein protein.
          Length = 979

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 78  KNGVKS*ISMCLLCSHPGWMMMLPLTGEK-ISTILKAAAVDVEP 206
           + GV+S  +M LLC  P W+M +P  G+   +T+L + AV   P
Sbjct: 144 EGGVQSPGNM-LLCLSPAWLMKVPAPGQPGEATLLVSKAVSFHP 186


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,178,706
Number of Sequences: 237096
Number of extensions: 1098732
Number of successful extensions: 1834
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1834
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)