Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_G08
(647 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 216 2e-58
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 216 2e-58
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 24 1.5
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 24 1.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 3.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 4.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.8
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 216 bits (527), Expect = 2e-58
Identities = 108/140 (77%), Positives = 119/140 (85%), Gaps = 2/140 (1%)
Frame = +1
Query: 232 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 411
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 412 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRV--LTRRRSSGVTSLV 585
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLG V T+ V +L
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLA 120
Query: 586 IWPPGGAAGATSLCFVYPLD 645
GGAAGATSLCFVYPLD
Sbjct: 121 ---SGGAAGATSLCFVYPLD 137
Score = 28.7 bits (61), Expect = 0.051
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +1
Query: 259 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 438
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 439 LSFWRGNFANVIRYFPTQALNFAFKD 516
+RG +V +A F F D
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYD 198
Score = 27.5 bits (58), Expect = 0.12
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +1
Query: 319 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 477
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 216 bits (527), Expect = 2e-58
Identities = 108/140 (77%), Positives = 119/140 (85%), Gaps = 2/140 (1%)
Frame = +1
Query: 232 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 411
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 412 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRV--LTRRRSSGVTSLV 585
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLG V T+ V +L
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLA 120
Query: 586 IWPPGGAAGATSLCFVYPLD 645
GGAAGATSLCFVYPLD
Sbjct: 121 ---SGGAAGATSLCFVYPLD 137
Score = 28.7 bits (61), Expect = 0.051
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +1
Query: 259 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 438
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 439 LSFWRGNFANVIRYFPTQALNFAFKD 516
+RG +V +A F F D
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYD 198
Score = 27.5 bits (58), Expect = 0.12
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +1
Query: 319 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 477
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 285 TASQEVLSERDRIGEVRHFVRLCDLQLGEYVEVG 184
TA + L ++ +I ++ +VR DL E+ +VG
Sbjct: 27 TADMDFLHKQKKIFDLLLYVRQADLSDAEWYDVG 60
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 285 TASQEVLSERDRIGEVRHFVRLCDLQLGEYVEVG 184
TA + L ++ +I ++ +VR DL E+ +VG
Sbjct: 27 TADMDFLHKQKKIFDLLLYVRQADLSDAEWYDVG 60
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -1
Query: 623 REVAPAAPPGGQITSEVTPELR 558
++++PA P G + + TPE++
Sbjct: 272 KKLSPATPKGSKCSMITTPEIK 293
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 4.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 228 VRLCDLQLGEYVEVGVAAHADGGSRNT 148
+RL D +LG + V V A G RNT
Sbjct: 330 LRLSDAELGLFCSVVVIAADRPGLRNT 356
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 7.8
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -1
Query: 614 APAAPPGGQITSEVTPELRLLVNTRPRNTC--LYLSLK 507
AP PP S + L L ++ P N C LY +++
Sbjct: 1498 APGIPPAATFLSPNSTTLVLRLHVWPDNGCPILYFTIQ 1535
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 7.8
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -1
Query: 614 APAAPPGGQITSEVTPELRLLVNTRPRNTC--LYLSLK 507
AP PP S + L L ++ P N C LY +++
Sbjct: 1494 APGIPPAATFLSPNSTTLVLRLHVWPDNGCPILYFTIQ 1531
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,277
Number of Sequences: 438
Number of extensions: 3172
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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