Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_G05
(648 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g19770.1 68415.m02310 profilin 4 (PRO4) (PFN4) identical to p... 99 1e-21
At5g56600.1 68418.m07065 profilin 5 (PRO5) (PRF3) identical to S... 96 2e-20
At4g29340.1 68417.m04192 profilin 3 (PRO3) (PFN3) identical to p... 95 3e-20
At4g29350.1 68417.m04193 profilin 2 (PRO2) (PFN2) (PRF2) identic... 93 1e-19
At2g19760.1 68415.m02309 profilin 1 (PRO1) (PFN1) (PRF1) / aller... 91 8e-19
At1g62420.1 68414.m07042 expressed protein contains Pfam profile... 33 0.22
At5g17850.1 68418.m02092 cation exchanger, putative (CAX8) simil... 29 2.7
At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma mem... 28 4.7
At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma m... 28 6.1
>At2g19770.1 68415.m02310 profilin 4 (PRO4) (PFN4) identical to
profilin 4 SP:Q38905 GI:1353768 from [Arabidopsis
thaliana]
Length = 134
Score = 99 bits (238), Expect = 1e-21
Identities = 55/133 (41%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
Frame = +1
Query: 91 MSWQDYVDKQLMASXC------VTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENE 249
MSWQ YVD+ LM +T AAI GHDG+VWA+S F + E+ I+ F+
Sbjct: 1 MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60
Query: 250 SLLTSGGVTIAGTRYIYLSGTDH-IIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAAS 426
L G+ +AG +Y+ + G + +IR K G G+ KT Q++V LYEEP+ P Q
Sbjct: 61 GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120
Query: 427 VVEKLXEYLITCG 465
VVE+L +YLI G
Sbjct: 121 VVERLGDYLIEQG 133
>At5g56600.1 68418.m07065 profilin 5 (PRO5) (PRF3) identical to
SP|Q9FE63 Profilin 5 {Arabidopsis thaliana}
Length = 168
Score = 96.3 bits (229), Expect = 2e-20
Identities = 54/130 (41%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Frame = +1
Query: 91 MSWQDYVDKQLM---ASXCVTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENESLL 258
MSWQ YVD LM A +T AAI G DG+VWA+S F ++ +E+ I F L
Sbjct: 38 MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97
Query: 259 TSGGVTIAGTRYIYLSGTDH-IIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVE 435
G+ + G +Y+ + G + +IR K G GV KT A+V +Y+EP+ P Q VVE
Sbjct: 98 APTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVE 157
Query: 436 KLXEYLITCG 465
L EYLI G
Sbjct: 158 NLGEYLIESG 167
>At4g29340.1 68417.m04192 profilin 3 (PRO3) (PFN3) identical to
profilin 3 SP:Q38904 GI:1353765 from [Arabidopsis
thaliana]
Length = 134
Score = 95.5 bits (227), Expect = 3e-20
Identities = 53/133 (39%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Frame = +1
Query: 91 MSWQDYVDKQLMASXC------VTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENE 249
MSWQ YVD+ LM +T AAI GHDG+VWA+S F + E + I+ F+
Sbjct: 1 MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60
Query: 250 SLLTSGGVTIAGTRYIYLSGTDH-IIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAAS 426
L G+ +AG +Y+ + G +IR K G G+ KT Q+ V +YEEP+ P Q
Sbjct: 61 GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120
Query: 427 VVEKLXEYLITCG 465
VVE+L +YL+ G
Sbjct: 121 VVERLGDYLLEQG 133
>At4g29350.1 68417.m04193 profilin 2 (PRO2) (PFN2) (PRF2) identical
to profilin 2 SP:Q42418 GI:1353772 from [Arabidopsis
thaliana]; identical to cDNA profilin (PRF2) GI:9965570
Length = 131
Score = 93.1 bits (221), Expect = 1e-19
Identities = 54/130 (41%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Frame = +1
Query: 91 MSWQDYVDKQLMASX---CVTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENESLL 258
MSWQ YVD LM +T AAI G DG+VWA+S F ++ E+A I FE L
Sbjct: 1 MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60
Query: 259 TSGGVTIAGTRYIYLSG-TDHIIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVE 435
G+ + G +Y+ + G +IR K G GV KT QA+V +Y+EP+ Q VVE
Sbjct: 61 APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVE 120
Query: 436 KLXEYLITCG 465
+L +YLI G
Sbjct: 121 RLGDYLIESG 130
>At2g19760.1 68415.m02309 profilin 1 (PRO1) (PFN1) (PRF1) / allergen
Ara t 8 identical to profilin 1 (Allergen Ara t 8)
SP:Q42449 GI:1353770 from [Arabidopsis thaliana]
Length = 131
Score = 90.6 bits (215), Expect = 8e-19
Identities = 52/127 (40%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Frame = +1
Query: 91 MSWQDYVDKQLMASX---CVTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENESLL 258
MSWQ YVD LM +T AAI G DG+VWA+S F ++ E+ I FE L
Sbjct: 1 MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60
Query: 259 TSGGVTIAGTRYIYLSGTDH-IIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVE 435
G+ + G +Y+ + G +IR K G GV KT QA+V Y+EP+ Q VVE
Sbjct: 61 APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVE 120
Query: 436 KLXEYLI 456
+L +YLI
Sbjct: 121 RLGDYLI 127
>At1g62420.1 68414.m07042 expressed protein contains Pfam profile
PF04720: Protein of unknown function (DUF506)
Length = 465
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +3
Query: 249 ITANEWRRDDSGHAVHLPQWHRPYHPREAWQGRRALHEDTASCGHFSL*RTHPTSAGRIC 428
I +E RR +H+P W R + + W G ++ T++ ++ + T+ T+A + C
Sbjct: 199 IMCHEMRRSMKHVGIHVPPWRRNGYMQAKWFG---FYKRTSTTNNYEMVNTYDTTAFKGC 255
Query: 429 RGE 437
+ E
Sbjct: 256 KEE 258
>At5g17850.1 68418.m02092 cation exchanger, putative (CAX8) similar
to sodium/calcium exchanger protein [Mus musculus]
gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 559
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2
Query: 323 MIWSVPLR*MYRVPAIVTPPLVSSDSFSKPATI 225
+IW++ L +P I+T P+VS D +SKP +
Sbjct: 307 VIWAITLP--LNLPRILTIPVVSEDKWSKPLAV 337
>At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA7)
identical to SP|O64806 Potential calcium-transporting
ATPase 7, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 7) {Arabidopsis thaliana}; strong
similarity to SP|O81108 Calcium-transporting ATPase 2,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
2) {Arabidopsis thaliana}
Length = 1015
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 184 KSEGFEISKDEVAKIVAGFENESLLTSGGV 273
K+ GF+I DE+ IV G + + L GGV
Sbjct: 90 KAAGFDICADELGSIVEGHDVKKLKFHGGV 119
>At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma
membrane-type / Ca2+-ATPase, isoform 4 (ACA4) identical
to SP|O22218 Calcium-transporting ATPase 4, plasma
membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4)
{Arabidopsis thaliana}
Length = 1030
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 184 KSEGFEISKDEVAKIVAGFENESLLTSGGV 273
K GF I DE+A +V + +SL GGV
Sbjct: 89 KKAGFSIEADELASMVRKNDTKSLAQKGGV 118
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,969,134
Number of Sequences: 28952
Number of extensions: 250345
Number of successful extensions: 566
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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