Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_G03
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...   100   1e-21
U49954-5|AAA93427.2|  445|Caenorhabditis elegans Odorant respons...    30   1.6  
U49954-4|AAN84809.1|  473|Caenorhabditis elegans Odorant respons...    30   1.6  
U49954-3|AAN84808.1|  475|Caenorhabditis elegans Odorant respons...    30   1.6  
AF055911-1|AAC39022.1|  445|Caenorhabditis elegans odorant respo...    30   1.6  
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    28   5.0  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score =  100 bits (239), Expect = 1e-21
 Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 9/140 (6%)
 Frame = +2

Query: 200 DIQIEGFNPSAEEA--DEGTDSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLV 373
           +I + G NPSAEE   D+G+D  VE G+DIVLNH+LVE   + D   +  Y+K +MK ++
Sbjct: 41  EIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVI 100

Query: 374 XKLEXKAPDQ--VEVFKTNMNKVMKDILG--RFKELQFFTGESM---DCDGMVAMMEYXD 532
             +E    D+  V+ FK  +   +  +L   RFK L FF GE       +G VA++EY D
Sbjct: 101 DHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRD 160

Query: 533 FDGTQIPIMMFFKHGLQXEK 592
            DGT++P +M  K  +  EK
Sbjct: 161 VDGTEVPTLMLVKEAIIEEK 180



 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = +1

Query: 79  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQG 198
           M IYKDI T DE+ SD++ MKLVD+++YE  G+ V R +G
Sbjct: 1   MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEG 40


>U49954-5|AAA93427.2|  445|Caenorhabditis elegans Odorant response
           abnormal protein4, isoform a protein.
          Length = 445

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 9/38 (23%), Positives = 23/38 (60%)
 Frame = -1

Query: 126 VREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQL 13
           ++ HL+ +    ++LH++ +E ++  ++ K G +  QL
Sbjct: 299 IKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQL 336


>U49954-4|AAN84809.1|  473|Caenorhabditis elegans Odorant response
           abnormal protein4, isoform c protein.
          Length = 473

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 9/38 (23%), Positives = 23/38 (60%)
 Frame = -1

Query: 126 VREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQL 13
           ++ HL+ +    ++LH++ +E ++  ++ K G +  QL
Sbjct: 327 IKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQL 364


>U49954-3|AAN84808.1|  475|Caenorhabditis elegans Odorant response
           abnormal protein4, isoform b protein.
          Length = 475

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 9/38 (23%), Positives = 23/38 (60%)
 Frame = -1

Query: 126 VREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQL 13
           ++ HL+ +    ++LH++ +E ++  ++ K G +  QL
Sbjct: 329 IKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQL 366


>AF055911-1|AAC39022.1|  445|Caenorhabditis elegans odorant response
           protein ODR-4 protein.
          Length = 445

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 9/38 (23%), Positives = 23/38 (60%)
 Frame = -1

Query: 126 VREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSPQQL 13
           ++ HL+ +    ++LH++ +E ++  ++ K G +  QL
Sbjct: 299 IKHHLVRNLFARVELHYESMEVVEEERSPKTGITVHQL 336


>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 218  FNPSAEEADEGTDSAVESG-VDIVLNH 295
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 218  FNPSAEEADEGTDSAVESG-VDIVLNH 295
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,299,110
Number of Sequences: 27780
Number of extensions: 253197
Number of successful extensions: 674
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)