Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_F23
         (507 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    24   2.6  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   4.5  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   4.5  

>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 449 TSTPGSMLIEVICFTISEGECRSITLLWIR 360
           +S+P +     +C+ +SE E   I +L+ R
Sbjct: 79  SSSPRTRQFRSVCYYVSESEMEKIEMLFAR 108


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 11/54 (20%), Positives = 24/54 (44%)
 Frame = +3

Query: 162 YPPHQDHSYFSQCALTREGLC*PHQWSQETEAACKGPSPHANQDPAYHHPENSL 323
           Y P + HS  +  + +  G    HQ S  + ++    S  ++   ++  P++ L
Sbjct: 83  YEPMECHSAVNSSSNSSTGYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSPDSPL 136


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 343 RSLNLHRKEFSGW*YAGSWLACGLGPL 263
           RSLN+ R  F G  ++  W    + PL
Sbjct: 659 RSLNIRRGIFQGDTFSTLWFCLAMNPL 685


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,927
Number of Sequences: 2352
Number of extensions: 12379
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)