BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fprWP02_F_F23 (507 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL132876-13|CAD21665.1| 117|Caenorhabditis elegans Hypothetical... 176 7e-45 U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 29 1.9 AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 28 3.4 AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical ... 28 4.5 Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical pr... 27 5.9 AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 27 5.9 U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily ass... 27 7.8 AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical ... 27 7.8 AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical ... 27 7.8 >AL132876-13|CAD21665.1| 117|Caenorhabditis elegans Hypothetical protein Y105E8A.16 protein. Length = 117 Score = 176 bits (429), Expect = 7e-45 Identities = 78/101 (77%), Positives = 95/101 (94%) Frame = +1 Query: 166 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 345 HRIR+TLTS+NV+ LEKVCA LI+GAK + L VKGP+RMPTK+LRITTRKTPCGEGSKTW Sbjct: 17 HRIRLTLTSQNVKPLEKVCAQLIDGAKNEHLIVKGPIRMPTKVLRITTRKTPCGEGSKTW 76 Query: 346 DRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 468 DRFQMRIHKR+I+LH+P+E+++QITSI+IEPGV++EVT AD Sbjct: 77 DRFQMRIHKRLINLHAPAEVLRQITSISIEPGVDIEVTRAD 117 >U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical protein H03E18.1 protein. Length = 1147 Score = 29.1 bits (62), Expect = 1.9 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = +1 Query: 208 LEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGE 330 +E V A + G KK+ + K + PTK +T++ P E Sbjct: 359 VELVTAKTVEGEKKETKKPKSTTKKPTKTAAASTKRPPTTE 399 >AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical protein W03F11.1 protein. Length = 235 Score = 28.3 bits (60), Expect = 3.4 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 126 QRHRETPGRGLPYPPHQDHSYFSQCA 203 Q HR PG +PYP DH+ F +C+ Sbjct: 84 QGHRCYPGTRIPYP--HDHTMFLECS 107 >AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical protein F28B3.1 protein. Length = 1539 Score = 27.9 bits (59), Expect = 4.5 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +1 Query: 139 KPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKK 249 + +A+ SP HRI +TS+N C+ L+ A++ Sbjct: 943 RSRAQSSPDHRILTLVTSKNAEQDTATCSTLLKRAER 979 >Z82272-6|CAB05222.1| 1431|Caenorhabditis elegans Hypothetical protein F55G11.9 protein. Length = 1431 Score = 27.5 bits (58), Expect = 5.9 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -2 Query: 503 FQKYFIGGSAYASAMVTSTSTPGSMLIEVICFT 405 F YF+ Y +A + +T T GS+L+ V C T Sbjct: 958 FLLYFVS-LVYLTASLINTPTKGSLLLYVFCLT 989 >AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical protein W03G1.5 protein. Length = 471 Score = 27.5 bits (58), Expect = 5.9 Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%) Frame = +3 Query: 84 PEFNKQHGSRCSVRQRHRETPGRGL-PYPPHQDHSYF 191 P + H R R H G P+PPH H +F Sbjct: 399 PPHHHHHDGRSPSRHGHHHHHHHGCRPFPPHHGHHHF 435 >U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily assigned gene nameprotein 158 protein. Length = 1003 Score = 27.1 bits (57), Expect = 7.8 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -2 Query: 206 ERTL-REVRVILMRWIGETSAWGFSMSLPDTTA 111 ERTL E R ++MR + + S G S+SLP A Sbjct: 838 ERTLLMEERTMMMRDLQKVSGGGMSLSLPPANA 870 >AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical protein C54E4.2a protein. Length = 226 Score = 27.1 bits (57), Expect = 7.8 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = +1 Query: 103 MAAAVVSGKDIEKPQAEVSPIH 168 ++AA +S +D+EKP + P+H Sbjct: 14 ISAAYISSEDLEKPSSADKPVH 35 >AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical protein C54E4.2b protein. Length = 234 Score = 27.1 bits (57), Expect = 7.8 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = +1 Query: 103 MAAAVVSGKDIEKPQAEVSPIH 168 ++AA +S +D+EKP + P+H Sbjct: 14 ISAAYISSEDLEKPSSADKPVH 35 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,066,864 Number of Sequences: 27780 Number of extensions: 270007 Number of successful extensions: 640 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 625 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 640 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 977860456 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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