Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_F21
         (585 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21409| Best HMM Match : No HMM Matches (HMM E-Value=.)              45   4e-05
SB_16551| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13)                   28   4.9  
SB_5817| Best HMM Match : DpmII (HMM E-Value=1.5)                      28   4.9  
SB_36671| Best HMM Match : IBB (HMM E-Value=2.8)                       27   8.5  
SB_9895| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.5  

>SB_21409| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 195

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
 Frame = +1

Query: 202 DIQIEGFNPSAEEADEGTDSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVXK 381
           D  + G N SAE+A +  +    +G ++V+ +RLVE   +   K      K Y+KK+   
Sbjct: 47  DENLIGGNKSAEDACDDVEDGCTTGCNVVMANRLVE-IPYKTFKELLAEFKPYIKKVKEH 105

Query: 382 L-EEKAPD-QVEVFKTNMNKVMKDILGRFKELQFFTGESMDCD 504
           + EE  PD +V+ F+      +  I   FKE QFF     DCD
Sbjct: 106 MKEEGCPDEEVKGFEKAAMDYILSIKKNFKEYQFF---QPDCD 145


>SB_16551| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 831

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 566 NIMIGICVPSKSVYSIMATMPSQSID 489
           N+ I +CVPS SV  +   MPS+  D
Sbjct: 633 NLHIYLCVPSTSVLKLTIIMPSRQFD 658


>SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13)
          Length = 3035

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 564  HHDWYLRTIKVCIFHHGNHAITIHRLPSKE 475
            H   YL    VC+     H  TIH++ S E
Sbjct: 2439 HSGQYLEAYTVCVKRQQQHGFTIHKISSAE 2468


>SB_5817| Best HMM Match : DpmII (HMM E-Value=1.5)
          Length = 529

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 12/74 (16%)
 Frame = +1

Query: 352 KDYMKKLVXKLEEKAP------------DQVEVFKTNMNKVMKDILGRFKELQFFTGESM 495
           +D+MK +V KL EK P            D V++ +     + K  +   K +++   +  
Sbjct: 272 RDFMKSVVSKLLEKTPIAYSVARNLAFLDPVQIVEDKEGSISKFKVVLKKMVEYKRVQMP 331

Query: 496 DCDGMVAMMEYTDF 537
           DCD +V   +YTDF
Sbjct: 332 DCDALV--HQYTDF 343


>SB_36671| Best HMM Match : IBB (HMM E-Value=2.8)
          Length = 1080

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 540 IKVCIFHHGNHAITIHRLPSK 478
           +K+C+ HH    IT H+ PSK
Sbjct: 205 LKLCLKHHLEDRITFHQQPSK 225


>SB_9895| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1547

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +1

Query: 205  IQIEGFNPSAEEADEGTDSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKD 357
            IQIE     A   DE      E  +     H  +ET+AFG   S +L +KD
Sbjct: 1369 IQIERDLIRATNRDEDDIFRSEEMISPTTTHVSLETFAFGSLYSISLSMKD 1419


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,000,887
Number of Sequences: 59808
Number of extensions: 323078
Number of successful extensions: 4116
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4116
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1410146228
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)