Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_F16
(505 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 111 7e-24
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 102 4e-21
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 99 5e-20
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 93 2e-18
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 83 5e-15
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 82 6e-15
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 72 6e-12
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 71 1e-11
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 69 6e-11
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 66 4e-10
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 62 5e-09
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 60 2e-08
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 59 5e-08
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 54 2e-06
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 51 2e-05
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 50 4e-05
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 46 4e-04
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 44 0.002
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 43 0.003
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 41 0.018
UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23; Bacter... 40 0.032
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 39 0.056
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 38 0.13
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 38 0.17
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 37 0.30
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 37 0.30
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 36 0.69
UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14; Bacter... 36 0.69
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 35 1.2
UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=... 35 1.2
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 35 1.2
UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234; Bacte... 34 2.1
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 34 2.1
UniRef50_A0T870 Cluster: Putative uncharacterized protein; n=2; ... 33 3.7
UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10; ... 33 4.8
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 111 bits (268), Expect = 7e-24
Identities = 54/67 (80%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Frame = +3
Query: 132 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 308
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 309 TTRKTPC 329
TTRKTPC
Sbjct: 66 TTRKTPC 72
Score = 96.7 bits (230), Expect = 3e-19
Identities = 44/48 (91%), Positives = 47/48 (97%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 474
GEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGV VEVTIA+
Sbjct: 73 GEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 102 bits (245), Expect = 4e-21
Identities = 51/67 (76%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = +3
Query: 132 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 308
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 309 TTRKTPC 329
TTRKTPC
Sbjct: 64 TTRKTPC 70
Score = 99.1 bits (236), Expect = 5e-20
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 477
GEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV VEVTIADA
Sbjct: 71 GEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 99.1 bits (236), Expect = 5e-20
Identities = 46/62 (74%), Positives = 55/62 (88%)
Frame = +3
Query: 141 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 320
+K Q S +HRIRITLTSRNVR+LEKVC+DL+N AK ++LRVKGPVR+PTKIL+ITTRK
Sbjct: 8 QKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTKILKITTRK 67
Query: 321 TP 326
TP
Sbjct: 68 TP 69
Score = 88.6 bits (210), Expect = 7e-17
Identities = 40/47 (85%), Positives = 45/47 (95%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIA 471
GEGSKTW+ ++MRIHKR+IDLHSPSEIVKQITSI+IEPGV VEVTIA
Sbjct: 71 GEGSKTWETYEMRIHKRLIDLHSPSEIVKQITSIHIEPGVEVEVTIA 117
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 93.5 bits (222), Expect = 2e-18
Identities = 43/48 (89%), Positives = 47/48 (97%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 474
GEGSKTWDRFQMRIHKRVIDL+SPSEIVKQITSI++EPGV VEVTIA+
Sbjct: 435 GEGSKTWDRFQMRIHKRVIDLYSPSEIVKQITSISLEPGVEVEVTIAN 482
Score = 61.7 bits (143), Expect = 9e-09
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +3
Query: 234 LINGAKKQKLRVKGPVRMPTKILRITTRKTPC 329
LI KKQKL+VKGPVRMPTKILRITTRKTPC
Sbjct: 403 LIQRGKKQKLKVKGPVRMPTKILRITTRKTPC 434
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 82.6 bits (195), Expect = 5e-15
Identities = 41/57 (71%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Frame = +3
Query: 132 KDIEK-PQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKI 299
KD K P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK+
Sbjct: 4 KDAGKAPVDQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKV 60
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 82.2 bits (194), Expect = 6e-15
Identities = 40/72 (55%), Positives = 53/72 (73%)
Frame = +3
Query: 114 AAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 293
AA+++ K + PQ +S +R+TLT+ +++ LEKV LI AK Q LRVKGPVRMPT
Sbjct: 2 AAMIAEKKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGPVRMPT 59
Query: 294 KILRITTRKTPC 329
K+LR+TTRKTPC
Sbjct: 60 KVLRVTTRKTPC 71
Score = 64.9 bits (151), Expect = 1e-09
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIA 471
GEGSKTWDRFQ+RIHKRVIDL S E Q+ I +EPGV +V ++
Sbjct: 72 GEGSKTWDRFQLRIHKRVIDLLSTDEATLQLKHIYLEPGVNCDVIVS 118
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 72.1 bits (169), Expect = 6e-12
Identities = 34/67 (50%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = +3
Query: 132 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKK-QKLRVKGPVRMPTKILRI 308
K+ +K + EV + R+RITLT +N++S+EK +++++ AKK +++ VKGPVRMPTK L I
Sbjct: 5 KETKKGEEEVKKV-RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTKTLVI 63
Query: 309 TTRKTPC 329
T RK+PC
Sbjct: 64 TVRKSPC 70
Score = 63.7 bits (148), Expect = 2e-09
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 468
GEGSKTWDRF+MRI+KR+IDL VK IT+ I+PGV +E+T+
Sbjct: 71 GEGSKTWDRFEMRIYKRIIDLTCNVPDVKTITNFRIDPGVEIELTM 116
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 70.9 bits (166), Expect = 1e-11
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +3
Query: 132 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRIT 311
KDI+ P I IT+TS V+++E +CA++ KK+ ++VKGPVR+PTK LRIT
Sbjct: 6 KDIKAPVTP-KVYKNITITITSTKVKAVESLCAEVKENGKKKGVQVKGPVRIPTKTLRIT 64
Query: 312 TRKTPC 329
TRKTPC
Sbjct: 65 TRKTPC 70
Score = 67.3 bits (157), Expect = 2e-10
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 474
GEGSKTWD +QMRI+KRV+ + + E VK+ITS+ +EPGV +EV + D
Sbjct: 71 GEGSKTWDHYQMRIYKRVLSMKTTPETVKEITSLKVEPGVELEVAMFD 118
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 68.9 bits (161), Expect = 6e-11
Identities = 29/63 (46%), Positives = 46/63 (73%)
Frame = +3
Query: 141 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 320
+K QA + +R+T+TSRN +++E V + L+ A+ +K+ + GPVR+PT+ L+ITTRK
Sbjct: 5 KKNQAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTRTLKITTRK 64
Query: 321 TPC 329
TPC
Sbjct: 65 TPC 67
Score = 66.9 bits (156), Expect = 2e-10
Identities = 27/48 (56%), Positives = 38/48 (79%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIAD 474
G G+ TWD F+++I+KR+IDLH+P+E VK+ITS +E GV V +TI D
Sbjct: 68 GNGTNTWDTFELKIYKRIIDLHAPTEQVKKITSFTMESGVDVSITILD 115
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 66.1 bits (154), Expect = 4e-10
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = +3
Query: 108 MAAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRM 287
MA VV D +K E P+ +IR+T+TS + +L++V +L+ KK L V+GP+ M
Sbjct: 1 MADRVVPTGDEKKEIVEDLPVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGPIPM 60
Query: 288 PTKILRITTRKTPC 329
P + LRITTR+ PC
Sbjct: 61 PRRRLRITTRRAPC 74
Score = 57.6 bits (133), Expect = 1e-07
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 468
G G++T+D F++RI+KRVID +E VKQ+T I +EP V VEV++
Sbjct: 75 GNGTETYDHFELRIYKRVIDFQGTAEAVKQVTQIALEPDVHVEVSV 120
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 62.5 bits (145), Expect = 5e-09
Identities = 27/46 (58%), Positives = 32/46 (69%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 468
GEGSKTWDRF+MRIHKRVID K IT+ I PG+ VE+ +
Sbjct: 75 GEGSKTWDRFEMRIHKRVIDFQCTLPTFKDITNFKIGPGINVELNV 120
Score = 45.2 bits (102), Expect = 8e-04
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Frame = +3
Query: 141 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAK----KQKLRV--KGPVRMPTKIL 302
EK + +IR+ +TSR+ + LE +I + Q +V KGPVRMPTK L
Sbjct: 6 EKKVEDEQQTKKIRMIVTSRSAQDLENFTNQVIEKTRGIQRDQGAQVVFKGPVRMPTKHL 65
Query: 303 RITTRKTPC 329
++T RK+PC
Sbjct: 66 KMTVRKSPC 74
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 60.5 bits (140), Expect = 2e-08
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +1
Query: 361 QMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 477
+M+IH ++IDL SPSEIVKQITS++IEP V EVTIADA
Sbjct: 33 KMKIHNQLIDLQSPSEIVKQITSVSIEPEVEAEVTIADA 71
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 59.3 bits (137), Expect = 5e-08
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = +3
Query: 177 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPC 329
+RITLTS+++ SLEK C ++I K+ ++GP+R+PTK + + RK+PC
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGPIRIPTKKINLNVRKSPC 66
Score = 58.0 bits (134), Expect = 1e-07
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 468
GEG+ TWD+F+M+IHKR+ID HS IT IN++ G+ ++ I
Sbjct: 67 GEGTNTWDKFEMKIHKRIIDFHSNKSEFNSITPINLDNGIEIDAQI 112
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 53.6 bits (123), Expect = 2e-06
Identities = 23/58 (39%), Positives = 36/58 (62%)
Frame = +1
Query: 295 RSCVSPPVKLLVGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 468
R V P K GEGS+TWD ++MR+HKR+ID+ + ++QI I + V +E+ +
Sbjct: 47 RRMVVPVRKAPDGEGSETWDHWEMRVHKRLIDISADERALRQIMRIQVPRDVNIEIVL 104
Score = 40.7 bits (91), Expect = 0.018
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 326
+ RI L+ N R L+++C+ + A K + + GPV +PT+ + + RK P
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTRRMVVPVRKAP 57
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 50.8 bits (116), Expect = 2e-05
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +3
Query: 180 RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPC 329
R+ LTS N+ L+ VC +++ K+ +R+KGP +P K L I TRK+PC
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVKKLHIATRKSPC 55
Score = 39.5 bits (88), Expect = 0.042
Identities = 12/44 (27%), Positives = 32/44 (72%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEV 462
G G++T+++++MR+H+R+ID+ + + ++++ + I V +E+
Sbjct: 56 GSGTETYEKWEMRMHRRIIDISADDKTIRRLIDLKIPDDVHLEL 99
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 49.6 bits (113), Expect = 4e-05
Identities = 16/53 (30%), Positives = 35/53 (66%)
Frame = +1
Query: 310 PPVKLLVGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 468
P ++L GEG K W+ ++M++HKR+ID+ + +++Q+ + + V +E+ +
Sbjct: 49 PVMRLPHGEGKKKWEHWEMKVHKRIIDIAADERVMRQLMRVRVPDDVYIEIEL 101
Score = 35.5 bits (78), Expect = 0.69
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 326
+ RI L S N+ SL V + N A+K ++V GP+ +PT + + + P
Sbjct: 4 KARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPTTRMEVPVMRLP 54
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 46.4 bits (105), Expect = 4e-04
Identities = 19/51 (37%), Positives = 34/51 (66%)
Frame = +1
Query: 316 VKLLVGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 468
++L GEG+K +D ++MRIHKR+ID+ ++++ I I + V +E+ I
Sbjct: 53 LRLPHGEGTKVFDHWEMRIHKRLIDVELNDKVMRNIMRIRVPSNVYIEIQI 103
Score = 39.9 bits (89), Expect = 0.032
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +3
Query: 165 PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 326
P + RI + S +V+S+E+V + A++ + V+GPV +P K L I+T + P
Sbjct: 3 PKNMARIKMWSTDVKSIEEVAKQIREIAERSGVEVRGPVPLPVKRLEISTLRLP 56
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 44.0 bits (99), Expect = 0.002
Identities = 17/46 (36%), Positives = 30/46 (65%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTI 468
G+G T+D ++MRIHKRV+D+ + ++Q+ + I V VE+ +
Sbjct: 74 GQGYHTYDHWEMRIHKRVVDMDADERALRQLMRLRIPEDVKVEIEL 119
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 165 PIHRI-RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 326
P+ RI RI + N S++ + D+ AKK ++V+GP+ +PT+ L +T R+ P
Sbjct: 18 PVPRIVRIRIWGTNTDSVDGLARDITGIAKKLGIKVRGPIPLPTRRLMVTVRRAP 72
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +3
Query: 168 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 326
+ RIR+ L + + R L++ A ++ K+ ++GP+ MPTKI R T K+P
Sbjct: 1 MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKIKRYTVLKSP 53
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 40.7 bits (91), Expect = 0.018
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 292 PRSCVSPPVKLLVGE-GSKTWDRFQMRIHKRVIDLHSPSEIVK 417
P + PV + G G+K WD +QMRIH+R+ID+ + +K
Sbjct: 41 PTKILRVPVLRITGHRGTKIWDTYQMRIHRRIIDIATDDRTIK 83
Score = 34.3 bits (75), Expect = 1.6
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 177 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 308
+RI + S ++ L +V + K+ ++++GP+ +PTKILR+
Sbjct: 4 LRIKIYSTDLEELNRVVEKIKEIVKQTGVKMRGPIPLPTKILRV 47
>UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Rickettsia
felis (Rickettsia azadi)
Length = 105
Score = 39.9 bits (89), Expect = 0.032
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +3
Query: 171 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 326
++I+I L S + RSL++ ++++ K+ + GP+ +P KI R T ++P
Sbjct: 3 NKIKIRLKSFDHRSLDQATKEIVSAVKRTFANINGPIPLPRKIERFTVNRSP 54
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 39.1 bits (87), Expect = 0.056
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +3
Query: 111 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 290
A+ V S I +++P +IRI L S V +E C +++ A+ + GPV +P
Sbjct: 73 ASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLP 132
Query: 291 TKILRITTRKTP 326
TK K+P
Sbjct: 133 TKKRIYCVLKSP 144
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 37.9 bits (84), Expect = 0.13
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 150 QAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 296
QA +IRI L S ++ C ++ AK + RV GPV +PTK
Sbjct: 31 QAAAVQASKIRIRLRSFETNHMQSACDKILEAAKATEARVSGPVPLPTK 79
Score = 32.3 bits (70), Expect = 6.4
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 352 DRFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVXVEVTI 468
+ F+ R H R+ID+H P ++ + + ++ + GV VE+ +
Sbjct: 97 EHFETRTHHRLIDVHQPTAQTIDALMALELPSGVDVEIKL 136
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 37.5 bits (83), Expect = 0.17
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 326
+IRI L S + L + +++ AK+ V GP+ +PT++ R T K+P
Sbjct: 3 KIRIKLKSFDSGILHRSTKEIVMAAKRNGALVSGPIPLPTRVSRYTVNKSP 53
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 36.7 bits (81), Expect = 0.30
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 326
RIRI L + + R +++ D++ AK+ +V GP+ +PTK R T +P
Sbjct: 5 RIRIRLKAFDHRLIDRSTLDIVETAKRTGAQVHGPIPLPTKKERFTILVSP 55
Score = 32.3 bits (70), Expect = 6.4
Identities = 12/40 (30%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 352 DRFQMRIHKRVIDLHSPSE-IVKQITSINIEPGVXVEVTI 468
D++++R HKR+ID+ P++ V + +++ GV V++++
Sbjct: 63 DQYEIRTHKRLIDIVDPTDKTVDALMKLDLAAGVDVQISL 102
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 36.7 bits (81), Expect = 0.30
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 326
RIRI L S + R +++ +++ AK+ +V GP+ MPT+I R +P
Sbjct: 5 RIRIRLKSFDHRLIDQSSQEIVETAKRTGAQVCGPIPMPTRIERFNVLTSP 55
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 35.5 bits (78), Expect = 0.69
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 326
+IRI L + R L++ D++ AK+ + GP+ +PT + T ++P
Sbjct: 14 KIRIRLKGYDQRLLDRSTGDIVETAKRTGAAIAGPIPLPTSCEKFTVLRSP 64
Score = 31.9 bits (69), Expect = 8.5
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 292 PRSCVSPPVKLLVGEGSKTWDRFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVXVEV 462
P SC V K+ ++F++R H+R+ID+ +P S+ + + ++ + GV +++
Sbjct: 52 PTSCEKFTVLRSPNIDRKSREQFEIRTHRRLIDILNPTSKTIDALKTLTLPAGVDIKI 109
>UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14;
Bacteria|Rep: 30S ribosomal protein S10 - Bdellovibrio
bacteriovorus
Length = 105
Score = 35.5 bits (78), Expect = 0.69
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTP 326
+IRI L + + + L++ +++ A++ +V GP+ +PT+I R T ++P
Sbjct: 5 KIRIRLKAFDHKLLDQSTKEIVETARRTGAKVAGPIPLPTRINRYTVLRSP 55
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 34.7 bits (76), Expect = 1.2
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIE-PGVXVEVTIAD 474
GEG+ TW RF++R++KR + + I S + PG+ V V + +
Sbjct: 74 GEGTNTWHRFELRMYKRTFWVTCGGNDISTILSKTVVIPGIQVTVEVEE 122
Score = 32.7 bits (71), Expect = 4.8
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 183 ITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPC 329
I + ++++ +E+ ++ + + GP R P + L ITTRK+PC
Sbjct: 27 IIVVGKDLKLVERYVKSIVKEGRA--FGISGPCRAPVRRLTITTRKSPC 73
>UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=1;
Reclinomonas americana|Rep: Mitochondrial ribosomal
protein S10 - Reclinomonas americana
Length = 116
Score = 34.7 bits (76), Expect = 1.2
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +3
Query: 168 IHRIRITLTSRNVRSLEKVCADLI-NGAKKQKLRVKGPVRMPTKILRITTRKTP 326
I + + L S ++ L+ CA ++ N Q L++ GP+ +PTKI +IT ++P
Sbjct: 3 ITKCSLHLKSFDLDVLKDSCALILKNKINLQNLKLTGPINLPTKIKKITVLRSP 56
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 34.7 bits (76), Expect = 1.2
Identities = 13/40 (32%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +1
Query: 352 DRFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVXVEVTI 468
+ F+ R H+R+ID++SPS + + + +++ GV +EV +
Sbjct: 67 EHFETRTHRRIIDIYSPSAKTIDALMKLDLPSGVDIEVKL 106
>UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234;
Bacteria|Rep: 30S ribosomal protein S10 - Listeria
innocua
Length = 102
Score = 33.9 bits (74), Expect = 2.1
Identities = 13/40 (32%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 352 DRFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVXVEVTI 468
++F+MR HKR+ID+ +P+ + V + +++ GV +E+ +
Sbjct: 63 EQFEMRTHKRLIDIVNPTPQTVDSLMRLDLPSGVDIEIKL 102
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 33.9 bits (74), Expect = 2.1
Identities = 13/40 (32%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 352 DRFQMRIHKRVIDLHSPS-EIVKQITSINIEPGVXVEVTI 468
++F+MR HKR+ID+ +P+ + V + +++ GV +E+ +
Sbjct: 63 EQFEMRTHKRLIDIVNPTPKTVDSLMKLDLPSGVDIEIKL 102
>UniRef50_A0T870 Cluster: Putative uncharacterized protein; n=2;
Burkholderia ambifaria|Rep: Putative uncharacterized
protein - Burkholderia ambifaria MC40-6
Length = 325
Score = 33.1 bits (72), Expect = 3.7
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +1
Query: 73 KLFISAGIQQATWQPL*CQAKTSRNPRQRSPLFTASGSLLLLAMCAHSRRSV 228
+ FI+AGI TWQPL T+R P + F+ G+L LLA A R S+
Sbjct: 231 RTFIAAGIHPETWQPL----ATARRPAMIA--FSIIGALGLLAFWAWGRMSL 276
>UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10;
n=1; Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S10 - Cyanidium caldarium
Length = 109
Score = 32.7 bits (71), Expect = 4.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 174 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTK 296
++RI L+S + L C +++ K+ VKGPV +PT+
Sbjct: 12 KVRIKLSSYSASLLNLSCNNVLQSIKESNTSVKGPVFLPTR 52
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,713,566
Number of Sequences: 1657284
Number of extensions: 10662057
Number of successful extensions: 25574
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 24954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25567
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -