Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_F16
(505 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20 pro... 102 6e-22
BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20 p... 102 6e-22
BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20 p... 102 6e-22
AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20 p... 102 6e-22
AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20 p... 85 1e-16
D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein. 30 5.3
BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7 pro... 30 5.3
>L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 102 bits (245), Expect = 6e-22
Identities = 51/67 (76%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = +3
Query: 132 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 308
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 309 TTRKTPC 329
TTRKTPC
Sbjct: 64 TTRKTPC 70
Score = 99.1 bits (236), Expect = 8e-21
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 477
GEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV VEVTIADA
Sbjct: 71 GEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 102 bits (245), Expect = 6e-22
Identities = 51/67 (76%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = +3
Query: 132 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 308
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 309 TTRKTPC 329
TTRKTPC
Sbjct: 64 TTRKTPC 70
Score = 99.1 bits (236), Expect = 8e-21
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 477
GEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV VEVTIADA
Sbjct: 71 GEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 102 bits (245), Expect = 6e-22
Identities = 51/67 (76%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = +3
Query: 132 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 308
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 309 TTRKTPC 329
TTRKTPC
Sbjct: 64 TTRKTPC 70
Score = 99.1 bits (236), Expect = 8e-21
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 477
GEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV VEVTIADA
Sbjct: 71 GEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 102 bits (245), Expect = 6e-22
Identities = 51/67 (76%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = +3
Query: 132 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 308
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 309 TTRKTPC 329
TTRKTPC
Sbjct: 64 TTRKTPC 70
Score = 99.1 bits (236), Expect = 8e-21
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVXVEVTIADA 477
GEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV VEVTIADA
Sbjct: 71 GEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20
protein.
Length = 60
Score = 85.0 bits (201), Expect = 1e-16
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +1
Query: 331 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 450
GEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV
Sbjct: 21 GEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGV 60
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 270 KGPVRMPTKILRITTRKTPC 329
KGPVRMPTK LRITTRKTPC
Sbjct: 1 KGPVRMPTKTLRITTRKTPC 20
>D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein.
Length = 1088
Score = 29.9 bits (64), Expect = 5.3
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 71 KSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYSPHQDHSYFSQCALTREGL 226
+ +S E + +G R SV QRHR TP R + P +D SY + EGL
Sbjct: 511 RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSAIEGL 564
>BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7
protein.
Length = 1080
Score = 29.9 bits (64), Expect = 5.3
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 71 KSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYSPHQDHSYFSQCALTREGL 226
+ +S E + +G R SV QRHR TP R + P +D SY + EGL
Sbjct: 503 RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSAIEGL 556
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,168,241
Number of Sequences: 237096
Number of extensions: 1739088
Number of successful extensions: 3704
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3704
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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