Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_F15
         (549 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   1.2  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   1.6  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   5.0  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   5.0  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   6.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.8  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   8.8  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 354  RQDFLXRVKENERLLKEAKAAGKTVNLKRQPAPP 455
            R++   R +E  +L  EA  A +  N + QP PP
Sbjct: 1101 REEDERRTEERRQLHNEANRAYRQRNRRSQPTPP 1134


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = +3

Query: 339 KHSKCRQDFLXRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTXK 488
           KH  C  +     +E +++ KEA    +T+NL +     +A  +  GT +
Sbjct: 323 KHRLCELNREPTEREEQQMQKEAAVMARTMNLNQVCLCFRAYRVEPGTGR 372


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
 Frame = -2

Query: 107 EPASEQVRWCRGX*PLEFVIFE-------PCVTKLDGSRKSN 3
           E  SE  +W +    LE+VI+E         + +LDG RKS+
Sbjct: 208 EELSEYQKWDKARRTLEYVIYETELKETRKQLEELDGQRKSS 249


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 193 TAPLPLMSTMSPTLYTFMYVE 131
           TA +P  S + PTL+  MY E
Sbjct: 607 TAGVPQGSVLGPTLWNLMYNE 627


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 253 VTLYTRPVFPWYTLCGIP 200
           V ++ RP  PW+++ GIP
Sbjct: 73  VGIFGRPGRPWWSVPGIP 90


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 317  DALRYNPSANTLVDNHTESMSSHVVH 240
            DA+R   + + +V NH E  S+  +H
Sbjct: 3072 DAIRIGSNESIVVPNHMERSSASSLH 3097


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 104 VPHTWNYSALHVHESVQS 157
           V +TWNY+A  V + V S
Sbjct: 282 VENTWNYTAADVADLVDS 299


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,343
Number of Sequences: 2352
Number of extensions: 11548
Number of successful extensions: 111
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)