Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_F12
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0543 + 3985771-3985866,3985965-3986145,3986668-3986780,398... 116 2e-26
11_06_0478 + 24073295-24074172,24074790-24075090 34 0.11
02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715 32 0.34
03_05_0409 + 23957965-23958374,23960112-23960433 31 0.60
02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033 31 1.1
03_05_0613 + 26124714-26124857,26125692-26126330,26126455-261266... 30 1.8
01_01_0385 + 2981293-2981345,2981803-2981851,2982215-2984953 29 3.2
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 29 4.2
09_02_0419 + 9046090-9046333,9046451-9046634,9046733-9046947,904... 28 5.6
03_05_0082 - 20595935-20596039,20596103-20596189,20596468-205965... 28 5.6
09_04_0465 + 17827224-17827997,17828711-17829024,17829949-178303... 28 7.4
07_03_0123 - 13688562-13689146,13689233-13689583,13689665-136898... 28 7.4
11_02_0086 + 8186355-8186667,8186773-8187335 27 9.8
>01_01_0543 +
3985771-3985866,3985965-3986145,3986668-3986780,
3986854-3987190,3987602-3987603,3987661-3987743,
3988017-3988116,3988330-3988463,3988711-3988788,
3989333-3989387,3990159-3990239,3990369-3990567,
3990609-3990699,3990770-3990892,3991440-3991528,
3992450-3992539,3992619-3992792,3992911-3993035,
3993246-3993372,3993826-3993998
Length = 816
Score = 116 bits (279), Expect = 2e-26
Identities = 62/141 (43%), Positives = 94/141 (66%)
Frame = +2
Query: 230 GFGRNYVEQYFQKTGNAVFLHIRREKQPIPEPEQTGDGPEKKITKLAIGVEGGFDPECGK 409
GFGR +V ++K+GN V+LHI + ++P EP+ D P KK T LAIGVEGGF + +
Sbjct: 47 GFGREHVAWNYEKSGNPVYLHIVQRRKP--EPDDEADRPLKKPTLLAIGVEGGFTDQ--E 102
Query: 410 PKFTYTDHYSVVVLPGFHTFPWPDPNLPEPVKKSVQAVIDAESPFKIAELAALQGTWDGE 589
P+ Y + + +V+LP F + P+P +LPE V+ +V VI AES + +LA +W +
Sbjct: 103 PE--YDEAFEIVILPEFTSLPFPSIDLPEKVRIAVDKVILAESADRKQQLA----SWVAD 156
Query: 590 KREVSVHSVNLKQLDNGIRIP 652
K++VS H+++LKQLDNG+ +P
Sbjct: 157 KKKVSAHAMDLKQLDNGVIVP 177
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +1
Query: 91 LSLLTSHLSKIKLPGPHQLVYKDECVYSFDNPESETGLYVSLVSFL 228
+ LL SHL K+++P P ++KDEC SFD P SE GLYV + SFL
Sbjct: 1 MDLLRSHLHKVRIPEPGSRIHKDECCVSFDTPRSEGGLYVDMTSFL 46
>11_06_0478 + 24073295-24074172,24074790-24075090
Length = 392
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +2
Query: 299 REKQPIPEPEQTGDGPEKKITKLAIGVEGGFDPECGKPKFTYTDHYSVVVLPGFHTFPWP 478
R + +P P Q + +T + +G F+P P + HY V ++P P P
Sbjct: 92 RRRATLPPPPQRACRDD--VTAIPVGEYLVFEPAVSSP----SPHYEVFLIPTVPGHPGP 145
Query: 479 DPNLPEPVKKSVQAVIDAESPFKIAE-LAALQG 574
P P ++ A A +PF + E LA+L+G
Sbjct: 146 PPTPPAHIRLKPMAA--AAAPFCLDERLASLRG 176
>02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715
Length = 1536
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 299 REKQPIPEPEQTGDGPEKKITKLAIGVEGGFDPECGKP 412
R +QP P G G ++ IT LA GV+ G DP C P
Sbjct: 1333 RGEQPHPVETAAGSGTQRIITSLADGVQRGSDP-CRAP 1369
>03_05_0409 + 23957965-23958374,23960112-23960433
Length = 243
Score = 31.5 bits (68), Expect = 0.60
Identities = 32/113 (28%), Positives = 44/113 (38%)
Frame = -2
Query: 615 TECTETSRFSPSQVPCNAANSAILNGDSASITA*TDFFTGSGKLGSGHGNV*NPGSTTTL 436
T T T+ ++ C ++S S + TA G G+LG G + G+TTT
Sbjct: 24 TSATTTAAGGCGELGCGGSDSGAATTTSVTTTA----AGGGGELGRGGSG--SGGATTTA 77
Query: 435 **SVYVNLGFPHSGSKPPSTPMASLVIFFSGPSPVCSGSGIGCFSLLICKKTA 277
LG SGS T A++ G C GSG G + TA
Sbjct: 78 A-GGSGELGRGGSGSGAAMTTSATMTAVGGGGELGCGGSGSGAAMTISATMTA 129
>02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033
Length = 1614
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 299 REKQPIPEPEQTGDGPEKKITKLAIGVEGGFDP 397
R +QP P G G ++ IT +A GV+ G DP
Sbjct: 1410 RGEQPHPVETAAGSGTQRIITSMADGVQHGSDP 1442
>03_05_0613 +
26124714-26124857,26125692-26126330,26126455-26126695,
26126913-26127496
Length = 535
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 401 CGKPKFTYTDHYSVVVLPGFHTFPWPDPNLPEPVKKSVQAVIDAES--PFKIAELAALQG 574
C P HY V+++P F P P+ L + ++ V V++A + P A
Sbjct: 252 CNGPLDRGRRHYEVLLIPSFRRKPGPNDYLYDKLRGEVDPVLEASTWPPASYAIPVFSSR 311
Query: 575 TWDGEKR 595
TW ++R
Sbjct: 312 TWLWQER 318
>01_01_0385 + 2981293-2981345,2981803-2981851,2982215-2984953
Length = 946
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = +2
Query: 341 GPEKKITKLAIGVEGGF---DPECGKP-KFTY-TDHYS--VVVLPGFHTFPWPDPNLPEP 499
GP+ T ++ V+G F DPE + K T +D YS VV+L P DP LP+P
Sbjct: 747 GPDMDETHVSTAVKGSFGYVDPEYVRTRKLTAKSDVYSFGVVLLEALCARPVVDPRLPKP 806
Query: 500 VKKSVQ 517
+ V+
Sbjct: 807 MVNLVE 812
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Frame = +2
Query: 338 DGPEKKITKLAIGVEGGF--DPECGKPKFTYTDHYSV------VVLPGFHTFPWPDPNLP 493
+G +KK+ K+ +EG + D + K + SV +V G H PWP+P P
Sbjct: 25 EGCKKKVKKVLHSIEGVYKTDIDVQHQKVVVIGNVSVDTLVKKLVKTGKHAEPWPEPAPP 84
Query: 494 EP 499
P
Sbjct: 85 PP 86
>09_02_0419 +
9046090-9046333,9046451-9046634,9046733-9046947,
9047261-9047384,9047462-9047633
Length = 312
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -1
Query: 358 DLLLGTIACLLWFRDWLFLSSDM*EDGVSGFLEILFNVIASESARMTPG 212
D LL T+AC++ +W + D E G+S E ++ + E A M G
Sbjct: 57 DRLLNTLACVIALMEWK-VHGDKREKGLSFIRENIWRLAQEEEAWMPVG 104
>03_05_0082 -
20595935-20596039,20596103-20596189,20596468-20596586,
20596686-20596924,20597044-20597100,20597203-20597909,
20599827-20600192
Length = 559
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 378 TPMASLVIFFSGPSPVCSGSGIGC 307
TP+ +L + +G PV SG +GC
Sbjct: 439 TPLLALTLILNGIQPVLSGVAVGC 462
>09_04_0465 +
17827224-17827997,17828711-17829024,17829949-17830397,
17830641-17830756
Length = 550
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 82 MASLSLLTSHLSKIKLPGPHQLVYKDECVYSFDNPESETGL 204
M SL + SH + LP PHQL + S P + L
Sbjct: 1 MESLRIAASHRPPLLLPSPHQLRRRHIAAVSLSLPHTSLSL 41
>07_03_0123 -
13688562-13689146,13689233-13689583,13689665-13689861,
13689954-13690072,13690103-13690245,13690332-13690544,
13690649-13690774,13690891-13691028,13691109-13691454,
13691532-13691798,13691939-13691983,13692148-13692349,
13692405-13692507,13692599-13692810,13692891-13693113,
13693211-13693291
Length = 1116
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 461 HTFPWPDPNLPEPVKKSVQAVIDAESPFKIAELAA 565
H P+ DPNLPE K S A + S +LAA
Sbjct: 196 HPLPYADPNLPESAKGSC-ATVQPRSMDPSKDLAA 229
>11_02_0086 + 8186355-8186667,8186773-8187335
Length = 291
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 516 KLLSMQNHHSKSQNWQHYKAP 578
KL+ M+NH+ +S+NW + P
Sbjct: 6 KLVPMKNHNPRSRNWVRARTP 26
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,891,878
Number of Sequences: 37544
Number of extensions: 449915
Number of successful extensions: 1213
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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