Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_F12
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88180-7|AAB42297.2|  789|Caenorhabditis elegans Hypothetical pr...    60   1e-09
AF098997-12|ABF71720.1|  377|Caenorhabditis elegans Hypothetical...    32   0.31 
U88314-7|AAF99887.2|  294|Caenorhabditis elegans Pharyngeal glan...    31   0.54 
AC090999-22|AAK26159.1|  481|Caenorhabditis elegans Hypothetical...    29   2.9  
AC024771-5|AAK70662.2|  227|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z81147-12|CAB03539.2|  494|Caenorhabditis elegans Hypothetical p...    27   8.7  
Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U40941-7|AAA81712.1|  312|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AL031635-6|CAA21044.1|  761|Caenorhabditis elegans Hypothetical ...    27   8.7  
AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical ...    27   8.7  
AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical ...    27   8.7  
AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical ...    27   8.7  

>U88180-7|AAB42297.2|  789|Caenorhabditis elegans Hypothetical
           protein T27A3.2 protein.
          Length = 789

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 42/136 (30%), Positives = 67/136 (49%)
 Frame = +2

Query: 233 FGRNYVEQYFQKTGNAVFLHIRREKQPIPEPEQTGDGPEKKITKLAIGVEGGFDPECGKP 412
           F R + E Y   +GN +F+     K+ I E  +T   P  K+TKL I  +         P
Sbjct: 53  FCREHAEIYGTTSGNTLFVQFESTKKIIEE--RTDGEPTSKMTKLTIDSD---------P 101

Query: 413 KFTYTDHYSVVVLPGFHTFPWPDPNLPEPVKKSVQAVIDAESPFKIAELAALQGTWDGEK 592
           KF + D Y VVV P +        NLPE + +++  + +  S  +++ L++    WD E 
Sbjct: 102 KFEFEDKYCVVVHPEYSQQVKNVQNLPE-IAEAIAQIANTTSAERLSLLSSTSNAWDAEI 160

Query: 593 REVSVHSVNLKQLDNG 640
           + ++ H  NL+Q DNG
Sbjct: 161 KLITKHQ-NLEQQDNG 175



 Score = 36.3 bits (80), Expect = 0.019
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +1

Query: 142 QLVYKDECVYSFDNPESETGLYVSLVSF 225
           Q ++KD+C Y F +P  + GLY+SL ++
Sbjct: 23  QKIFKDQCAYCFKDPHGKDGLYISLKNY 50


>AF098997-12|ABF71720.1|  377|Caenorhabditis elegans Hypothetical
           protein T10D4.1 protein.
          Length = 377

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = +2

Query: 449 LPGFHT---FPWPDPNLPEPVKKSVQAVIDAESPFKI 550
           +PG HT   F W +  +P+P   +VQAV+    PF I
Sbjct: 56  VPGTHTTIAFRWRESEIPKPDDDTVQAVLGTAGPFDI 92


>U88314-7|AAF99887.2|  294|Caenorhabditis elegans Pharyngeal gland
           toxin-relatedprotein 1 protein.
          Length = 294

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 125 NCQDRISLCTKTNVYILLTTRNPRRVSMC 211
           +C  R +LC  +N Y L+TT+ PR    C
Sbjct: 150 DCPARAALCNDSNYYTLMTTQCPRTCGRC 178



 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 125 NCQDRISLCTKTNVYILLTTRNPRRVSMC 211
           +C  R SLC  +  Y ++TT+ PR    C
Sbjct: 203 DCPARASLCNNSVYYDIMTTQCPRTCGRC 231


>AC090999-22|AAK26159.1|  481|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.17a protein.
          Length = 481

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +2

Query: 131 QDR-ISLCTKTNVYILLTTRNPRRVSMCPWCHSCGFGRNYVEQYFQKTGNAVFLHIRREK 307
           Q+R +   T T + +   T+NP        C  C FG N   Q+     +  F H+R+EK
Sbjct: 196 QEREVPALTSTGLVLPKCTKNPNDEGFTFHCDLCSFGTNCNIQFLNV--HFYFEHVRKEK 253


>AC024771-5|AAK70662.2|  227|Caenorhabditis elegans Hypothetical
           protein Y40B10A.7 protein.
          Length = 227

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 321 SGIGCFSLLICKKTAFPVFWKYCST*LRP 235
           SG   F+ +  +KT++P +++ C T LRP
Sbjct: 140 SGTFDFAFIDAEKTSYPAYYEKCVTLLRP 168


>Z81147-12|CAB03539.2|  494|Caenorhabditis elegans Hypothetical
           protein T09E11.6 protein.
          Length = 494

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +2

Query: 170 ILLTTRNPRRVSMCPWCHSCGFGRNYVEQYFQKTGNAVFLH 292
           +LLTT  P ++ +  W H C   R  VE  FQK   ++F+H
Sbjct: 307 LLLTT--PMKI-VKGWVH-CSLSRASVEWMFQKLDPSIFMH 343


>Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical
           protein F36H2.1c protein.
          Length = 1071

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/55 (23%), Positives = 23/55 (41%)
 Frame = +2

Query: 473 WPDPNLPEPVKKSVQAVIDAESPFKIAELAALQGTWDGEKREVSVHSVNLKQLDN 637
           W D       ++ ++ ++ A  P   AEL A    +   K  +S  S N+  + N
Sbjct: 606 WLDEECSNMAREGLRTLVVARKPLSQAELEAFDRAYHAAKMSISDRSQNMANVVN 660


>Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical
           protein F36H2.1b protein.
          Length = 1035

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/55 (23%), Positives = 23/55 (41%)
 Frame = +2

Query: 473 WPDPNLPEPVKKSVQAVIDAESPFKIAELAALQGTWDGEKREVSVHSVNLKQLDN 637
           W D       ++ ++ ++ A  P   AEL A    +   K  +S  S N+  + N
Sbjct: 570 WLDEECSNMAREGLRTLVVARKPLSQAELEAFDRAYHAAKMSISDRSQNMANVVN 624


>Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical
           protein F36H2.1a protein.
          Length = 1074

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/55 (23%), Positives = 23/55 (41%)
 Frame = +2

Query: 473 WPDPNLPEPVKKSVQAVIDAESPFKIAELAALQGTWDGEKREVSVHSVNLKQLDN 637
           W D       ++ ++ ++ A  P   AEL A    +   K  +S  S N+  + N
Sbjct: 609 WLDEECSNMAREGLRTLVVARKPLSQAELEAFDRAYHAAKMSISDRSQNMANVVN 663


>U40941-7|AAA81712.1|  312|Caenorhabditis elegans Hypothetical
           protein F35C8.8 protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
 Frame = +3

Query: 411 LNLHTLIITVWWCYQDFTHSHG-LILIYQNL*RNQFKLLSMQNHHSKSQN-WQHYKAPGM 584
           L LHTL ++  WC+   + S G L   +  L ++ + ++       K +  W H++    
Sbjct: 154 LLLHTLSLSFSWCHFIISGSCGKLTFDFFFLLKSNYTVVYRTLDFQKLRTVWLHHQVLPP 213

Query: 585 VKNVKFLYTLLTSSS 629
             +V +L T++  SS
Sbjct: 214 ANSVSYLITIILKSS 228


>AL031635-6|CAA21044.1|  761|Caenorhabditis elegans Hypothetical
           protein Y47D3B.9 protein.
          Length = 761

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 528 MQNHHSKSQNWQHYKAPGMVKNVKFLY 608
           M+ H   S+ W+HYK     +NV+ +Y
Sbjct: 346 MRPHKKTSEIWEHYKCLNEKQNVECIY 372


>AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical
           protein F36H2.1c protein.
          Length = 1071

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/55 (23%), Positives = 23/55 (41%)
 Frame = +2

Query: 473 WPDPNLPEPVKKSVQAVIDAESPFKIAELAALQGTWDGEKREVSVHSVNLKQLDN 637
           W D       ++ ++ ++ A  P   AEL A    +   K  +S  S N+  + N
Sbjct: 606 WLDEECSNMAREGLRTLVVARKPLSQAELEAFDRAYHAAKMSISDRSQNMANVVN 660


>AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical
           protein F36H2.1b protein.
          Length = 1035

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/55 (23%), Positives = 23/55 (41%)
 Frame = +2

Query: 473 WPDPNLPEPVKKSVQAVIDAESPFKIAELAALQGTWDGEKREVSVHSVNLKQLDN 637
           W D       ++ ++ ++ A  P   AEL A    +   K  +S  S N+  + N
Sbjct: 570 WLDEECSNMAREGLRTLVVARKPLSQAELEAFDRAYHAAKMSISDRSQNMANVVN 624


>AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical
           protein F36H2.1a protein.
          Length = 1074

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/55 (23%), Positives = 23/55 (41%)
 Frame = +2

Query: 473 WPDPNLPEPVKKSVQAVIDAESPFKIAELAALQGTWDGEKREVSVHSVNLKQLDN 637
           W D       ++ ++ ++ A  P   AEL A    +   K  +S  S N+  + N
Sbjct: 609 WLDEECSNMAREGLRTLVVARKPLSQAELEAFDRAYHAAKMSISDRSQNMANVVN 663


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,123,230
Number of Sequences: 27780
Number of extensions: 380678
Number of successful extensions: 1082
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)