Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_F11
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 119 2e-27
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 116 1e-26
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 105 3e-23
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 82 3e-16
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 69 4e-12
Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical pr... 67 9e-12
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 64 6e-11
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 63 2e-10
Z83113-3|CAB05545.1| 479|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical... 49 3e-06
Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 47 1e-05
Z73899-7|CAA98077.1| 492|Caenorhabditis elegans Hypothetical pr... 44 7e-05
U40952-1|AAK68681.3| 436|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical... 42 5e-04
AL132948-43|CAB61061.2| 511|Caenorhabditis elegans Hypothetical... 36 0.019
AL110487-4|CAB54427.1| 505|Caenorhabditis elegans Hypothetical ... 36 0.025
U43375-10|AAA83627.1| 520|Caenorhabditis elegans Hypothetical p... 33 0.13
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 31 0.95
U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 30 1.7
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 30 1.7
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 30 1.7
AY150829-1|AAN75511.1| 477|Caenorhabditis elegans KVS-2 protein. 29 2.9
AF541979-1|AAO65852.1| 490|Caenorhabditis elegans KVS-1 protein. 29 2.9
U28734-4|AAR30209.1| 477|Caenorhabditis elegans K (potassium) v... 29 3.8
U28734-3|AAR25654.1| 495|Caenorhabditis elegans K (potassium) v... 29 3.8
U28734-2|AAB52604.3| 490|Caenorhabditis elegans K (potassium) v... 29 3.8
Z66567-7|CAC42386.3| 414|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF199013-1|AAG28557.1| 414|Caenorhabditis elegans organic catio... 28 5.1
Z83105-7|CAB05491.1| 432|Caenorhabditis elegans Hypothetical pr... 28 6.7
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 28 6.7
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 27 8.9
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 27 8.9
U41508-8|AAG00026.4| 553|Caenorhabditis elegans Abnormal catech... 27 8.9
U41508-7|AAP46273.2| 490|Caenorhabditis elegans Abnormal catech... 27 8.9
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 27 8.9
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 119 bits (286), Expect = 2e-27
Identities = 66/195 (33%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Frame = +1
Query: 103 SYKVPXSRPAKM--SSGGTTGALLYAVSAAVLGMLQFGFNTGVINAPRKFIENFV----R 264
SY P + K+ G T L ++ L QFG++ G +NAP I ++ +
Sbjct: 24 SYSTPGTTTQKIIFPDGKLTKCLAFSAFVITLASFQFGYHIGCVNAPGGLITEWIIGSHK 83
Query: 265 DNYEAKPS-----LIFSVIVSIFAVXGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXX 429
D ++ + S L +SV VS+FAV GMIG + W+ D GR+ AL YN
Sbjct: 84 DLFDKELSRENADLAWSVAVSVFAVGGMIGGLSSGWLADKVGRRGALFYNNLLALAAAAL 143
Query: 430 MGFSKLATSVEMLIIGRFLIGINCGFATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMT 609
MG +K + M+I+GR +IG+NCGF++ P +++EI+P +RG G+++QL V +
Sbjct: 144 MGLAKSVGAYPMVILGRLIIGLNCGFSSALVPMFLTEISPNNLRGMLGSLHQLLVTIAIL 203
Query: 610 CGQILGIDVILGSDE 654
QI G+ +LG+ +
Sbjct: 204 VSQIFGLPHLLGTGD 218
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 116 bits (279), Expect = 1e-26
Identities = 62/179 (34%), Positives = 99/179 (55%), Gaps = 9/179 (5%)
Frame = +1
Query: 145 GGTTGALLYAVSAAVLGMLQFGFNTGVINAPRKFIENFV----RDNYEAKPS-----LIF 297
G T L ++ L QFG++ G +NAP I ++ +D ++ + S L +
Sbjct: 22 GKLTKCLAFSAFVITLASFQFGYHIGCVNAPGGLITEWIIGSHKDLFDKELSRENADLAW 81
Query: 298 SVIVSIFAVXGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIG 477
SV VS+FAV GMIG + W+ D GR+ AL YN MG +K + M+I+G
Sbjct: 82 SVAVSVFAVGGMIGGLSSGWLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVILG 141
Query: 478 RFLIGINCGFATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQILGIDVILGSDE 654
R +IG+NCGF++ P +++EI+P +RG G+++QL V + QI G+ +LG+ +
Sbjct: 142 RLIIGLNCGFSSALVPMFLTEISPNNLRGMLGSLHQLLVTIAILVSQIFGLPHLLGTGD 200
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 105 bits (252), Expect = 3e-23
Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 9/174 (5%)
Frame = +1
Query: 154 TGALLYAVSAAVLGMLQFGFNTGVINAPRKFIENFVRDNY---------EAKPSLIFSVI 306
T L + +S+ L Q GF G INAP I ++++ + + + I+SV
Sbjct: 44 TPFLFFCISSIALASFQDGFQIGCINAPGPLIIDWIKKCHFELFGEVLSQYQADFIWSVA 103
Query: 307 VSIFAVXGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIGRFL 486
VS+F+V GM G + ++ D GRK LLYN + SKL M++ GRFL
Sbjct: 104 VSMFSVGGMFGSFCSGFLADKFGRKSTLLYNNILALLAAVCLSTSKLFNFYPMIVFGRFL 163
Query: 487 IGINCGFATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQILGIDVILGS 648
+G+NCG + P +++E+AP +RG G+ +QL + + Q LG+ I G+
Sbjct: 164 VGLNCGITSGLVPMFLTELAPANLRGKCGSFHQLNISVAIVLSQALGLPQIFGT 217
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 82.2 bits (194), Expect = 3e-16
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 9/173 (5%)
Frame = +1
Query: 154 TGALLYAVSAAVLGMLQFGFNTGVINAPRKFIENFVR----DNYEAKPSL-----IFSVI 306
T L V+ VLG ++ GV+N + I +++ D Y+A SL I+S +
Sbjct: 3 TSRYLITVTTVVLGGSAQFYSYGVVNPAQVVITDWINQTYIDRYKAPLSLTVSNVIWSFV 62
Query: 307 VSIFAVXGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIGRFL 486
VS A+ ++G + + GR+ + +N +K +S E+LI GRF+
Sbjct: 63 VSSIAIGAILGASFTRIIGEKYGRRNGMFFNGILNVFAALFELVAKRFSSPELLIFGRFV 122
Query: 487 IGINCGFATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQILGIDVILG 645
GIN G ++ P Y+ EI P + RG GT++Q+AV F ++G+ +LG
Sbjct: 123 YGINMGLSSGLVPMYLMEITPYKYRGPAGTLHQIAVAFSDWFSLLIGLPEVLG 175
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 68.5 bits (160), Expect = 4e-12
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Frame = +1
Query: 121 SRPAKMSSGGTTGALLYAVS-AAVLGMLQFGFNTGVINAPRKFIENFVRDNYEAKPSLIF 297
S + SS TG +Y ++ +AV+G FG++TG+++A ++ N + S+
Sbjct: 13 SGQTRPSSDPKTGWFVYMLAFSAVIGGFLFGYDTGIVSAAMLYVPN--ASGIKPLDSVWQ 70
Query: 298 SVIVSIFAVXGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIG 477
+IVSI IG + D GRKK ++ A + +L+IG
Sbjct: 71 EIIVSITPGVAAIGSLCSGPGSDFLGRKKIIIGASVTFTIGAIICA---AAWTKIILLIG 127
Query: 478 RFLIGINCGFATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQILG 627
R L+G+ GFA+ P YVSE +P +RG T QL + G+ I+G
Sbjct: 128 RILLGLAIGFASMIVPIYVSEASPSHIRGKLVTGFQLMITVGLVIANIIG 177
>Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical
protein F13B12.2 protein.
Length = 512
Score = 67.3 bits (157), Expect = 9e-12
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Frame = +1
Query: 187 VLGMLQFGFNTGVINAPRKFIENFVRDNYE---------AKPSLIFSVIVSIFAVXGMIG 339
+L +L G+ ++N P K + F+ D++E + SL++S+ VS V +IG
Sbjct: 39 LLSILPVGYYIVLLNVPEKVFQAFIFDHFENIFGLQLSKTEESLVWSLTVSSQGVGALIG 98
Query: 340 CPLASWMLDTQGRKKALL-YNXXXXXXXXXXMGFSKLATSVEMLIIGRFLIGINCGFATT 516
C + S + G K L+ N M S T I+GR L G+ G A
Sbjct: 99 CLIVS-PISKFGAKDVLMRLNNVILIAGSLLMFLSYWITFPIAFIVGRILTGVYTGLACA 157
Query: 517 ASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQILGIDVILGSD 651
+P Y+ +I P ++G+ +AV FG + G I + + GS+
Sbjct: 158 FAPLYLQQIIPKNIKGSMSCFLHIAVCFGSSLGAIFSLPFMFGSE 202
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 64.5 bits (150), Expect = 6e-11
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 3/160 (1%)
Frame = +1
Query: 157 GALLYAVSAA-VLGMLQFGFNTGVINAPRKFIENFVRDNYEAKPSLIFSVIVSIFAVXGM 333
G +Y ++AA V+G FG++T V++A ++ + + ++ V+VSI
Sbjct: 22 GLFVYILAAASVIGGFLFGYDTSVVSAAMLYMPD--APGLKPMDTVWQEVLVSISPGMAA 79
Query: 334 IGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVE--MLIIGRFLIGINCGF 507
+G ++ D GR+K +L +G A SV ML++GR L+GI GF
Sbjct: 80 VGSLMSGTSSDYIGRRKVIL-----GASAIFTIGALVCAASVNKIMLLVGRVLLGIAIGF 134
Query: 508 ATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQILG 627
A+ P Y+ E AP +RG L + FG I G
Sbjct: 135 ASMIVPVYLGETAPTHVRGMLVAAFALMISFGQVVANITG 174
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 62.9 bits (146), Expect = 2e-10
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 1/180 (0%)
Frame = +1
Query: 91 VLIISYKVPXSRPAKMSSGGTTGALLYAV-SAAVLGMLQFGFNTGVINAPRKFIENFVRD 267
++ + +KV S + G +Y + SAA++G FG++T V++A ++
Sbjct: 1 MVAVEFKVSESGRPRPEKNPKLGFFVYLLGSAAIIGGFLFGYDTSVVSAAMLYVPE--AP 58
Query: 268 NYEAKPSLIFSVIVSIFAVXGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKL 447
+ ++ VIVSI +G + D GRK ++ + +
Sbjct: 59 GLKPMGTVWKEVIVSITPGMAAVGAWFSGAGSDRYGRKPIIIGSTLIFVCGAVICA---V 115
Query: 448 ATSVEMLIIGRFLIGINCGFATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQILG 627
A + +++IGR +G+ GFA+ P Y+ E +P +RG + + + FG I+G
Sbjct: 116 AWTKIVMLIGRIFLGVGIGFASMVVPVYLGEASPTHVRGTLVSAFAMMISFGQVVANIMG 175
>Z83113-3|CAB05545.1| 479|Caenorhabditis elegans Hypothetical
protein K08H10.6 protein.
Length = 479
Score = 60.1 bits (139), Expect = 1e-09
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 9/188 (4%)
Frame = +1
Query: 112 VPXSRPAKMSSGGTTGALLYAVSAAVLGMLQFGFNTGVINAPRKFIENFVRDN------Y 273
+P R + TT L +V A G FG+ +N + ++ F+ DN Y
Sbjct: 4 LPLERNLETPPHLTTRLLATSVVATFAGGFHFGYLISAVNPLSEILQQFIVDNLQNRYSY 63
Query: 274 E---AKPSLIFSVIVSIFAVXGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSK 444
E ++ SLI+S + + MIG ++ ++L + G + +LL G +
Sbjct: 64 ELSSSQLSLIWSSLAGCLFIGAMIGAYISIFLLQSIGPRNSLLLAAILQLFSAPVFGLAY 123
Query: 445 LATSVEMLIIGRFLIGINCGFATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQIL 624
E+L I R L GI +A +++EI+P + RG +++ L L
Sbjct: 124 SLRLCELLPISRILSGIAFAIGISAQGVFLTEISPAKFRGLTNSLSGLIGNCAFLLAATL 183
Query: 625 GIDVILGS 648
G +LG+
Sbjct: 184 GTPYVLGT 191
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 55.6 bits (128), Expect = 3e-08
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 9/170 (5%)
Frame = +1
Query: 172 AVSAAVLGMLQFGFNTGVINAPRKFIENFVR-------DNYEAKPSL--IFSVIVSIFAV 324
AV ++ G FGFN + N ++ NF+ D + +L I+S +V+I +
Sbjct: 13 AVITSIAGSFHFGFNLVLTNPSQEAFLNFMNQTLAKRFDGGLSDNTLQNIWSFVVAILFL 72
Query: 325 XGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIGRFLIGINCG 504
+ G + D GRK L + SK E+ I R ++G +
Sbjct: 73 GALAGSFSIRLIADWIGRKNGLYISIAVGVLAGGMSIASKFIPLFELYIASRIVMGWSVS 132
Query: 505 FATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQILGIDVILGSDE 654
+ S ++SE +P + RGA G + V G CG ++ + I G+++
Sbjct: 133 VSLGLSALFLSEASPKQNRGAIGMMTGTCVQLGTVCGSVIAMPQIFGTED 182
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 52.0 bits (119), Expect = 4e-07
Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 9/173 (5%)
Frame = +1
Query: 163 LLYAVSAAVLGMLQFGFNTGVINAPRKFIENFVRDNYEAK---------PSLIFSVIVSI 315
L+ AV ++ G +G+N + N + +F+ + + I+S +V++
Sbjct: 10 LIVAVITSMAGSFHYGYNLVLTNPSQDAFLSFMNQTFAKRFDGGLSDHTLQNIWSFVVAV 69
Query: 316 FAVXGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIGRFLIGI 495
+ + G ++ + GRK L + SK E+ II R ++G
Sbjct: 70 LFLGALAGSFSIPFIAEGVGRKNGLYISISVGVLAGGMSIASKFIPLFELYIISRVVMGW 129
Query: 496 NCGFATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQILGIDVILGSDE 654
+ + S ++SE +P + RGA G + A+ G G ++ + I G+D+
Sbjct: 130 SVSVSLGLSGIFLSEASPKQNRGAIGMMTGTAIQLGTVVGSVVAMPQIFGTDD 182
>AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical
protein Y61A9LA.1 protein.
Length = 526
Score = 48.8 bits (111), Expect = 3e-06
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 10/165 (6%)
Frame = +1
Query: 166 LYAVSAAVLGMLQFGFNTGVINAPRKFIENFVRDNY---------EAKPSLIFSVIVSIF 318
+ +++ + Q G+ V+N P IE F+ ++ ++ L++S++ F
Sbjct: 40 ILSIALCLSSGFQQGYIASVLNQPYAQIEQFINSSWIERTGHPISDSTLHLLWSLLNVCF 99
Query: 319 AVXGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLA-TSVEMLIIGRFLIGI 495
+ + G LA WM GRK L +K + E+L +GR + +
Sbjct: 100 PIATIFGQFLAGWMCSQFGRKHTALIASFLYIPGALLCAAAKWCFPAFELLFVGRIIWSL 159
Query: 496 NCGFATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQILGI 630
G T + ++ E AP ++RG + + + G Q +G+
Sbjct: 160 ANGVNTVNATVWIVECAPPQIRGRMAAMQEFFMALGSLLTQAVGV 204
>Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 46.8 bits (106), Expect = 1e-05
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
Frame = +1
Query: 205 FGFNTGVINAPRKFIENFVRDNY--------EAKPSLIFSVIVSIFAVXGMIGCPLASWM 360
+GF+T IN + F+ + E K LI++V ++ + + G + S
Sbjct: 25 YGFSTTYINTSVDEFKTFLNTSLSRRHVIMTEEKYDLIWNVFLNCWFIGSFFGVWINSIF 84
Query: 361 LDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIGRFLIGINCGFATTASPT-YVS 537
+ GR+ L S + E+LI+ RF+ I C AT S ++
Sbjct: 85 SERFGRRVGFLIGNSVAFISSILQCLSLIWYCPELLIVSRFITSI-CMAATYQSCILFLQ 143
Query: 538 EIAPVRMRGAFGTVNQLAVGFGMTCGQILGIDVILGS 648
E +P +RG+F +++++ G LG D I+GS
Sbjct: 144 ECSPTHLRGSFSFLSEVSYSSMTMVGSFLGQDYIIGS 180
>Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 46.8 bits (106), Expect = 1e-05
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
Frame = +1
Query: 205 FGFNTGVINAPRKFIENFVRDNY--------EAKPSLIFSVIVSIFAVXGMIGCPLASWM 360
+GF+T IN + F+ + E K LI++V ++ + + G + S
Sbjct: 25 YGFSTTYINTSVDEFKTFLNTSLSRRHVIMTEEKYDLIWNVFLNCWFIGSFFGVWINSIF 84
Query: 361 LDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIGRFLIGINCGFATTASPT-YVS 537
+ GR+ L S + E+LI+ RF+ I C AT S ++
Sbjct: 85 SERFGRRVGFLIGNSVAFISSILQCLSLIWYCPELLIVSRFITSI-CMAATYQSCILFLQ 143
Query: 538 EIAPVRMRGAFGTVNQLAVGFGMTCGQILGIDVILGS 648
E +P +RG+F +++++ G LG D I+GS
Sbjct: 144 ECSPTHLRGSFSFLSEVSYSSMTMVGSFLGQDYIIGS 180
>Z73899-7|CAA98077.1| 492|Caenorhabditis elegans Hypothetical
protein ZK829.9 protein.
Length = 492
Score = 44.4 bits (100), Expect = 7e-05
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 6/168 (3%)
Frame = +1
Query: 160 ALLYAVSAAVLGMLQFGFNTGVINAPRKFIENFVRDNYEA----KPSLIFSVIVSIFAVX 327
+LL A++ G NT V + +++ N + Y + SL+ S I S + +
Sbjct: 20 SLLTAMTNFPSGFSHTSVNTAV-HKLNEYLNNSFTERYRPLDHEEVSLLKSGINSAWYLF 78
Query: 328 GMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIGRFLIGINCGF 507
++G + ++ D GRK A + + E+LI GR + +
Sbjct: 79 QVVGAMSSPFLCDNYGRKVAFALSIAFMTLAGAMQMLASFTPYSEVLIAGRLIAAVFSPL 138
Query: 508 ATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTC--GQILGIDVILG 645
+ A Y+ EI+P +RG ++ + G+ C G +LG + +LG
Sbjct: 139 SDAALILYLQEISPSSLRGTMSSL--YSTGYSTMCLLGMLLGHEGLLG 184
>U40952-1|AAK68681.3| 436|Caenorhabditis elegans Hypothetical
protein C03B1.13 protein.
Length = 436
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +1
Query: 451 TSVEMLIIGRFLIGINCGFATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQILGI 630
T +L IGR +IG+ G + P Y+ EI+P R Q++ F G +LG
Sbjct: 53 TFATILSIGRLMIGLQAGSSLCLLPLYIIEISPAHYRSFLNNFQQVSQSFATLLGLVLGS 112
Query: 631 DVIL 642
+ IL
Sbjct: 113 EEIL 116
>AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical
protein Y66D12A.13 protein.
Length = 533
Score = 41.5 bits (93), Expect = 5e-04
Identities = 30/83 (36%), Positives = 36/83 (43%)
Frame = +1
Query: 331 MIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIGRFLIGINCGFA 510
M+G +A + D GRKK L FS +S+E+ II RF IGI CG
Sbjct: 126 MLGSAIAGQLSDLYGRKKITLLFLCMMLFFSTSSSFS---SSIEVFIIVRFFIGICCGGL 182
Query: 511 TTASPTYVSEIAPVRMRGAFGTV 579
TT V E P R TV
Sbjct: 183 TTVGSILVVENLPSAHRLWMSTV 205
>AL132948-43|CAB61061.2| 511|Caenorhabditis elegans Hypothetical
protein Y39B6A.41 protein.
Length = 511
Score = 36.3 bits (80), Expect = 0.019
Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 5/119 (4%)
Frame = +1
Query: 223 VINAPRK-FIENFVRDNYEAKPSLIFSVIVSIFAVXGMIGCPLA----SWMLDTQGRKKA 387
++N P K F +R NY + F I S A IG ++ ++D GRK+
Sbjct: 31 LMNVPIKGFFRESLRKNYGVESEETFETIFSACASFMFIGLAISFAIMGKLMDGLGRKET 90
Query: 388 LLYNXXXXXXXXXXMGFSKLATSVEMLIIGRFLIGINCGFATTASPTYVSEIAPVRMRG 564
+L M S L E +IG + G+ GF +++E +P RG
Sbjct: 91 ILLRSFLGIIGSMAMLTSLLLNRFEFYVIGHLIAGMLQGFRVVLI-IWIAECSPDSKRG 148
>AL110487-4|CAB54427.1| 505|Caenorhabditis elegans Hypothetical
protein Y39E4B.5 protein.
Length = 505
Score = 35.9 bits (79), Expect = 0.025
Identities = 39/166 (23%), Positives = 62/166 (37%), Gaps = 4/166 (2%)
Frame = +1
Query: 160 ALLYAVSAAVLGMLQFGFNTGVINAPRKFIENFVRD----NYEAKPSLIFSVIVSIFAVX 327
A L A++ G NT V KFI +R + E +L S ++ + V
Sbjct: 13 AALSAITNFPSGFTNSSVNTAVEKL-HKFIATSLRQPGVPDDENTIALFQSATLNCWFVA 71
Query: 328 GMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIGRFLIGINCGF 507
+ G + + D GRK + FS LI+GR L +
Sbjct: 72 QIFGAIMTPMISDGYGRKFGYIVCVTTTIFATFVQYFSICFYMPWGLILGRSLTALVSPL 131
Query: 508 ATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQILGIDVILG 645
YV E +P+ +RG + ++ G G +LG+ +LG
Sbjct: 132 GDACLLLYVQETSPLEIRGMSSFLCEIGYGTMCVLGMVLGMKSVLG 177
>U43375-10|AAA83627.1| 520|Caenorhabditis elegans Hypothetical
protein K09C4.1a protein.
Length = 520
Score = 33.5 bits (73), Expect = 0.13
Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Frame = +1
Query: 301 VIVSIFAVXGMIGCPLASWML----DTQGRKKALLYNXXXXXXXXXXMGFSKLATS---V 459
V+ SIFAV G LA L D++GRK +Y F LATS
Sbjct: 60 VLNSIFAVTHETGNALAIIFLLPVADSRGRKFMAVYLRFALLFLTGF--FHLLATSFQAA 117
Query: 460 EMLIIGRFLIGINCGFATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQIL 624
E +G+ +GI +P Y+ E AP RG T A+ F + G++L
Sbjct: 118 EAYTLGQLFLGIQSPLHLLITPMYILECAPDNCRGFAST----ALIFSFSIGKLL 168
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 30.7 bits (66), Expect = 0.95
Identities = 26/112 (23%), Positives = 43/112 (38%)
Frame = +1
Query: 301 VIVSIFAVXGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIGR 480
+I ++F + MIG P+ ++ D RK +L F + + R
Sbjct: 48 MIQTVFLISFMIGSPICGYLGDRFNRKYVMLVGIVIWLICVCASTFIP-RNLFPLFLFFR 106
Query: 481 FLIGINCGFATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQILGIDV 636
L+GI PT +S++ R + LAV G G I+ +V
Sbjct: 107 SLVGIGEASYVNICPTMISDMFTSDKRTRVYMLFYLAVPVGSGLGYIISSNV 158
>U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical
protein F48E3.2 protein.
Length = 488
Score = 30.3 bits (65), Expect = 1.3
Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 7/170 (4%)
Frame = +1
Query: 163 LLYAVSAAVLGMLQFGFNTGVINAP----RKFIENFVRDNYEAKPSLI---FSVIVSIFA 321
L+ + A+ + Q G+ N R F+ + Y S +S +++I+
Sbjct: 9 LILSAVLAITAIFQMGYTNAYPNTAIGSFRIFLNESANEPYTLSNSEFEWAWSAMLAIYF 68
Query: 322 VXGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIGRFLIGINC 501
+ G +++ + D GRK L F+ + M R ++ ++
Sbjct: 69 IGFAAGSVISAGVADRIGRKWTLFLGTCGSLLSSLIALFAIILKMPLMFGFSRLVMSLSA 128
Query: 502 GFATTASPTYVSEIAPVRMRGAFGTVNQLAVGFGMTCGQILGIDVILGSD 651
+ E +P MRG ++A G + G+ ILG +
Sbjct: 129 AISMNGLILLFQESSPSHMRGLISFNAEMAFVITNLIGGLFGMQSILGQN 178
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +1
Query: 172 AVSAAVLGM--LQFGFNTGVINAPRKFIENFVRDNYEAKP--SLIFSVIVSIFAVXGM 333
A+ A + GM LQF F+T V NA K I + D E P +F+ + ++A G+
Sbjct: 80 AMGALLDGMKQLQFDFSTRVCNAHEKLIRETLNDKAEYGPFSDAMFNALTELWADKGV 137
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +1
Query: 172 AVSAAVLGM--LQFGFNTGVINAPRKFIENFVRDNYEAKP--SLIFSVIVSIFAVXGM 333
A+ A + GM LQF F+T V NA K I + D E P +F+ + ++A G+
Sbjct: 80 AMGALLDGMKQLQFDFSTRVCNAHEKLIRETLNDKAEYGPFSDAMFNALTELWADKGV 137
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +1
Query: 172 AVSAAVLGM--LQFGFNTGVINAPRKFIENFVRDNYEAKP--SLIFSVIVSIFAVXGM 333
A+ A + GM LQF F+T V NA K I + D E P +F+ + ++A G+
Sbjct: 80 AMGALLDGMKQLQFDFSTRVCNAHEKLIRETLNDKAEYGPFSDAMFNALTELWADKGV 137
>AY150829-1|AAN75511.1| 477|Caenorhabditis elegans KVS-2 protein.
Length = 477
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +1
Query: 82 LVEVLIISYKVPXSRPAKMSSGGTTGALLYAVSAAVLGMLQFGFNTGVI--NAPRKFIEN 255
+V VL + V + + SSG T AL SA LGM+ +TGV+ + F+E
Sbjct: 345 VVRVLRVPRVVRILKLGRYSSGMRTFALTLRSSARQLGMMGMVLSTGVVFFSTLLYFVEK 404
Query: 256 FVRDN-YEAKPSLIFSVIVSIFAV 324
+D + + P+ + IV++ V
Sbjct: 405 DEKDTPFTSIPAAFWWAIVTMTTV 428
>AF541979-1|AAO65852.1| 490|Caenorhabditis elegans KVS-1 protein.
Length = 490
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +1
Query: 82 LVEVLIISYKVPXSRPAKMSSGGTTGALLYAVSAAVLGMLQFGFNTGVI--NAPRKFIEN 255
+V VL + V + + SSG T AL SA LGM+ +TGV+ + F+E
Sbjct: 345 VVRVLRVPRVVRILKLGRYSSGMRTFALTLRSSARQLGMMGMVLSTGVVFFSTLLYFVEK 404
Query: 256 FVRDN-YEAKPSLIFSVIVSIFAV 324
+D + + P+ + IV++ V
Sbjct: 405 DEKDTPFTSIPAAFWWAIVTMTTV 428
>U28734-4|AAR30209.1| 477|Caenorhabditis elegans K (potassium)
voltage-gated sensorychannel subunit protein 1, isoform
c protein.
Length = 477
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +1
Query: 82 LVEVLIISYKVPXSRPAKMSSGGTTGALLYAVSAAVLGMLQFGFNTGVI--NAPRKFIEN 255
+V VL + V + + SSG T AL SA LGM+ +TGV+ + F+E
Sbjct: 345 VVRVLRVLRVVRILKLGRYSSGMRTFALTLKSSARQLGMMGMVLSTGVVFFSTLLYFVEK 404
Query: 256 FVRDN-YEAKPSLIFSVIVSIFAV 324
+D + + P+ + IV++ V
Sbjct: 405 DEKDTPFTSIPAAFWWAIVTMTTV 428
>U28734-3|AAR25654.1| 495|Caenorhabditis elegans K (potassium)
voltage-gated sensorychannel subunit protein 1, isoform
b protein.
Length = 495
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +1
Query: 82 LVEVLIISYKVPXSRPAKMSSGGTTGALLYAVSAAVLGMLQFGFNTGVI--NAPRKFIEN 255
+V VL + V + + SSG T AL SA LGM+ +TGV+ + F+E
Sbjct: 350 VVRVLRVLRVVRILKLGRYSSGMRTFALTLKSSARQLGMMGMVLSTGVVFFSTLLYFVEK 409
Query: 256 FVRDN-YEAKPSLIFSVIVSIFAV 324
+D + + P+ + IV++ V
Sbjct: 410 DEKDTPFTSIPAAFWWAIVTMTTV 433
>U28734-2|AAB52604.3| 490|Caenorhabditis elegans K (potassium)
voltage-gated sensorychannel subunit protein 1, isoform
a protein.
Length = 490
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +1
Query: 82 LVEVLIISYKVPXSRPAKMSSGGTTGALLYAVSAAVLGMLQFGFNTGVI--NAPRKFIEN 255
+V VL + V + + SSG T AL SA LGM+ +TGV+ + F+E
Sbjct: 345 VVRVLRVLRVVRILKLGRYSSGMRTFALTLKSSARQLGMMGMVLSTGVVFFSTLLYFVEK 404
Query: 256 FVRDN-YEAKPSLIFSVIVSIFAV 324
+D + + P+ + IV++ V
Sbjct: 405 DEKDTPFTSIPAAFWWAIVTMTTV 428
>Z66567-7|CAC42386.3| 414|Caenorhabditis elegans Hypothetical
protein ZK455.8b protein.
Length = 414
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/90 (21%), Positives = 39/90 (43%)
Frame = +1
Query: 316 FAVXGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIGRFLIGI 495
+++ ++GC + ++ D GRK A+ + +SK E+ ++ RFL+
Sbjct: 26 YSLGYLVGCFVGGFISDRYGRKTAITGFGILTMLFGFLLTYSK---EFEIFLVVRFLLAA 82
Query: 496 NCGFATTASPTYVSEIAPVRMRGAFGTVNQ 585
A A+ E+ + R G++ Q
Sbjct: 83 TNEAADLAAYVLCMEVTGTKYRSIVGSLIQ 112
>Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical
protein ZK455.8a protein.
Length = 757
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/90 (21%), Positives = 39/90 (43%)
Frame = +1
Query: 316 FAVXGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIGRFLIGI 495
+++ ++GC + ++ D GRK A+ + +SK E+ ++ RFL+
Sbjct: 314 YSLGYLVGCFVGGFISDRYGRKTAITGFGILTMLFGFLLTYSK---EFEIFLVVRFLLAA 370
Query: 496 NCGFATTASPTYVSEIAPVRMRGAFGTVNQ 585
A A+ E+ + R G++ Q
Sbjct: 371 TNEAADLAAYVLCMEVTGTKYRSIVGSLIQ 400
>AF199013-1|AAG28557.1| 414|Caenorhabditis elegans organic cation
transporter protein.
Length = 414
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/90 (21%), Positives = 39/90 (43%)
Frame = +1
Query: 316 FAVXGMIGCPLASWMLDTQGRKKALLYNXXXXXXXXXXMGFSKLATSVEMLIIGRFLIGI 495
+++ ++GC + ++ D GRK A+ + +SK E+ ++ RFL+
Sbjct: 26 YSLGYLVGCFVGGFISDRYGRKTAITGFGILTMLFGFLLTYSK---EFEIFLVVRFLLAA 82
Query: 496 NCGFATTASPTYVSEIAPVRMRGAFGTVNQ 585
A A+ E+ + R G++ Q
Sbjct: 83 TNEAADLAAYVLCMEVTGTKYRSIVGSLIQ 112
>Z83105-7|CAB05491.1| 432|Caenorhabditis elegans Hypothetical
protein F14H3.7 protein.
Length = 432
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 477 TNDEHFN*SRQFTETHKSCSNNTECCVIE 391
TNDE+FN R+ ET C + C+ E
Sbjct: 326 TNDEYFNIQRKIIETINICVVASAMCIAE 354
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = -3
Query: 254 FSMNFLGALMTPVLK----PNCSIPKTAALTAYSSAPVVP-PLDI 135
F+ N+ G+ T LK PNCS A+T Y+ VP P D+
Sbjct: 117 FASNWSGSYNTDTLKEWGEPNCSAEVAKAITTYAYECAVPRPADL 161
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 338 DVHLPVGCSILKDERRLC 391
DVHLP G +IL + R LC
Sbjct: 1446 DVHLPNGLTILPNRRELC 1463
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 99 HFI*GPLXSSCKDVERWYNGGTAVRGERGRLGNATIRL*HRR 224
+F+ + SSC E+W+N A GE+ L L RR
Sbjct: 705 NFLLPSIFSSCGTFEQWFNAPFATTGEKVELNQEETMLIIRR 746
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical
protein F01G4.1 protein.
Length = 1474
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 99 HFI*GPLXSSCKDVERWYNGGTAVRGERGRLGNATIRL*HRR 224
+F+ + SSC E+W+N A GE+ L L RR
Sbjct: 705 NFLLPSIFSSCGTFEQWFNAPFATTGEKVELNQEETMLIIRR 746
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 99 HFI*GPLXSSCKDVERWYNGGTAVRGERGRLGNATIRL*HRR 224
+F+ + SSC E+W+N A GE+ L L RR
Sbjct: 538 NFLLPSIFSSCSTFEQWFNAPFATTGEKVELTQEETMLIIRR 579
>U41508-8|AAG00026.4| 553|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 1, isoform a protein.
Length = 553
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 430 MGFSKL----ATSVEMLIIGRFLIGINCGFATTASPTYVSEIAPVRMRGAFGTVNQLA 591
+GFS L ATSV LII L+G + G + + + +R G +G++ +A
Sbjct: 396 IGFSLLSIPSATSVAGLIIPHALLGFSIGMIDASMFPLMGYLVDIRHVGVYGSIYAIA 453
>U41508-7|AAP46273.2| 490|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 1, isoform b protein.
Length = 490
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +1
Query: 430 MGFSKL----ATSVEMLIIGRFLIGINCGFATTASPTYVSEIAPVRMRGAFGTVNQLA 591
+GFS L ATSV LII L+G + G + + + +R G +G++ +A
Sbjct: 333 IGFSLLSIPSATSVAGLIIPHALLGFSIGMIDASMFPLMGYLVDIRHVGVYGSIYAIA 390
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 99 HFI*GPLXSSCKDVERWYNGGTAVRGERGRLGNATIRL*HRR 224
+F+ + SSC E+W+N A GE+ L L RR
Sbjct: 705 NFLLPSIFSSCGTFEQWFNAPFATTGEKVELNQEETMLIIRR 746
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,351,346
Number of Sequences: 27780
Number of extensions: 291152
Number of successful extensions: 1009
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -