Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_F05
(650 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 161 2e-38
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 160 3e-38
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 157 2e-37
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 134 1e-30
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 121 2e-26
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 121 2e-26
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 119 5e-26
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 110 2e-23
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 110 3e-23
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 103 4e-21
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 98 2e-19
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 94 3e-18
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 93 4e-18
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 80 5e-14
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 74 3e-12
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 70 4e-11
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 52 1e-05
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 41 0.030
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 40 0.068
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 39 0.090
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 39 0.090
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 37 0.36
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 37 0.48
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 36 0.64
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 34 3.4
UniRef50_A6QZZ0 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 4.5
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 161 bits (390), Expect = 2e-38
Identities = 80/123 (65%), Positives = 90/123 (73%)
Frame = +2
Query: 236 RAVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQXIPXL 415
+ ++TN RVRLL+SKGHSCYRPRR GERKRKSVRGCIVD+ LSVL+LVIV+KG Q IP L
Sbjct: 65 QGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQDIPGL 124
Query: 416 TDGNVPRRLGPKRASKIRKLFNLSXXXXXXXXXXXXXLPAXEGKENAKPRHNAPXIQRLV 595
TD +PRRLGPKR KIRK+FNLS LP EGK K + AP IQRLV
Sbjct: 125 TDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPLPEKEGK---KAKSKAPKIQRLV 181
Query: 596 TPV 604
TPV
Sbjct: 182 TPV 184
Score = 114 bits (274), Expect = 2e-24
Identities = 48/66 (72%), Positives = 54/66 (81%)
Frame = +1
Query: 43 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 222
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 223 FPMKQG 240
FPMKQG
Sbjct: 61 FPMKQG 66
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 160 bits (388), Expect = 3e-38
Identities = 84/122 (68%), Positives = 90/122 (73%)
Frame = +2
Query: 236 RAVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQXIPXL 415
+ VLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG + IP L
Sbjct: 65 QGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGL 124
Query: 416 TDGNVPRRLGPKRASKIRKLFNLSXXXXXXXXXXXXXLPAXEGKENAKPRHNAPXIQRLV 595
TD VPRRLGPKRAS+IRKLFNLS L KE KPR AP IQRLV
Sbjct: 125 TDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL----NKEGKKPRTKAPKIQRLV 180
Query: 596 TP 601
TP
Sbjct: 181 TP 182
Score = 120 bits (289), Expect = 3e-26
Identities = 52/66 (78%), Positives = 58/66 (87%)
Frame = +1
Query: 43 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 222
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 223 FPMKQG 240
FPMKQG
Sbjct: 61 FPMKQG 66
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 157 bits (381), Expect = 2e-37
Identities = 79/123 (64%), Positives = 90/123 (73%)
Frame = +2
Query: 236 RAVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQXIPXL 415
+ VLTN+RVRLL+ KGHSCYRPRR GERKRKSVRGCIVD NLS LAL++V+KG + IP L
Sbjct: 65 QGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGL 124
Query: 416 TDGNVPRRLGPKRASKIRKLFNLSXXXXXXXXXXXXXLPAXEGKENAKPRHNAPXIQRLV 595
TD V RRLGPKRAS IRKL+NL+ LP +GK KPR AP IQRL+
Sbjct: 125 TDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDGK---KPRTKAPKIQRLI 181
Query: 596 TPV 604
TPV
Sbjct: 182 TPV 184
Score = 124 bits (299), Expect = 2e-27
Identities = 53/66 (80%), Positives = 60/66 (90%)
Frame = +1
Query: 43 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 222
MKLNVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 223 FPMKQG 240
FPMKQG
Sbjct: 61 FPMKQG 66
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 134 bits (325), Expect = 1e-30
Identities = 60/66 (90%), Positives = 62/66 (93%)
Frame = +1
Query: 43 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 222
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 223 FPMKQG 240
FPMKQG
Sbjct: 61 FPMKQG 66
Score = 58.0 bits (134), Expect = 2e-07
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +2
Query: 236 RAVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQXIPXL 415
+ VLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 65 QGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----- 118
Query: 416 TDGNVPRRLGPKRASKIRKLFNL 484
P RLGP R+S I K++ L
Sbjct: 119 -----PCRLGPVRSSNISKIYYL 136
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 121 bits (291), Expect = 2e-26
Identities = 64/121 (52%), Positives = 77/121 (63%)
Frame = +2
Query: 236 RAVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQXIPXL 415
+ VLTN+RVRLL KG CYRPR+ GE++RKSVRGCIV +LS L L +V+KG IP L
Sbjct: 106 QGVLTNNRVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGL 165
Query: 416 TDGNVPRRLGPKRASKIRKLFNLSXXXXXXXXXXXXXLPAXEGKENAKPRHNAPXIQRLV 595
TD V ++LGPKRA+KIRKLFNL + +N K R P IQRLV
Sbjct: 166 TDKAVGKKLGPKRATKIRKLFNLDKTDDVRKYVIGRAI-----SKNGKNRFIKPKIQRLV 220
Query: 596 T 598
T
Sbjct: 221 T 221
Score = 84.2 bits (199), Expect = 2e-15
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = +1
Query: 37 QLMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDK 216
Q MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDK
Sbjct: 40 QKMKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDK 99
Query: 217 QGFPMKQG 240
QGFPM QG
Sbjct: 100 QGFPMMQG 107
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 121 bits (291), Expect = 2e-26
Identities = 63/121 (52%), Positives = 75/121 (61%)
Frame = +2
Query: 236 RAVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQXIPXL 415
+ VL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA I L
Sbjct: 65 QGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGL 124
Query: 416 TDGNVPRRLGPKRASKIRKLFNLSXXXXXXXXXXXXXLPAXEGKENAKPRHNAPXIQRLV 595
TD NVPRRLGPKR +K+R+LF K+ K R AP IQRLV
Sbjct: 125 TDQNVPRRLGPKRLTKLRRLFGFKKADGVAIVQKNLIRRTWTTKD-GKKRQKAPKIQRLV 183
Query: 596 T 598
T
Sbjct: 184 T 184
Score = 101 bits (243), Expect = 1e-20
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = +1
Query: 43 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 222
MK N+SYP TG QK E+ D+ K IF++KRMG VEAD LG+E+KGYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 223 FPMKQG 240
FPM+QG
Sbjct: 61 FPMRQG 66
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 119 bits (287), Expect = 5e-26
Identities = 64/121 (52%), Positives = 76/121 (62%)
Frame = +2
Query: 236 RAVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQXIPXL 415
+ VL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA I L
Sbjct: 70 QGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGL 129
Query: 416 TDGNVPRRLGPKRASKIRKLFNLSXXXXXXXXXXXXXLPAXEGKENAKPRHNAPXIQRLV 595
TD NVPRRLGPKR +K+R+LF P GK+ R AP IQRLV
Sbjct: 130 TDQNVPRRLGPKRLTKLRRLFGFKKADRVISSEEHG--PQRYGKK----RQKAPKIQRLV 183
Query: 596 T 598
T
Sbjct: 184 T 184
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 110 bits (265), Expect = 2e-23
Identities = 47/65 (72%), Positives = 55/65 (84%)
Frame = +1
Query: 43 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 222
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 223 FPMKQ 237
FPMKQ
Sbjct: 61 FPMKQ 65
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 404 IPXLTDGNVPRRLGPKRASKIRKLFNLS 487
IP LTD PR +GPKRAS+IRKLFNLS
Sbjct: 82 IPGLTDTTEPRHVGPKRASRIRKLFNLS 109
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 110 bits (264), Expect = 3e-23
Identities = 62/139 (44%), Positives = 77/139 (55%), Gaps = 1/139 (0%)
Frame = +2
Query: 188 YFVSLAATTSKDS-R*NRAVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLS 364
Y +A KD + V+ RVRLL+S+GHSC+ RR G RKRKSVRGCIV ++
Sbjct: 48 YVFKIAGGNDKDGFPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMR 107
Query: 365 VLALVIVRKGAQXIPXLTDGNVPRRLGPKRASKIRKLFNLSXXXXXXXXXXXXXLPAXEG 544
VLAL IV+KG I LT +PR+LGPKRA+ I+KLF L +
Sbjct: 108 VLALQIVKKGVAEIDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFK- 166
Query: 545 KENAKPRHNAPXIQRLVTP 601
K R P IQRL+TP
Sbjct: 167 TAKGKDRTKCPKIQRLITP 185
Score = 101 bits (241), Expect = 2e-20
Identities = 43/66 (65%), Positives = 51/66 (77%)
Frame = +1
Query: 43 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 222
MK N+SYP TG QK E+ D+ K IF +K+MG EVE D LGDE+KGYV ++AGGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 223 FPMKQG 240
FPMKQG
Sbjct: 61 FPMKQG 66
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 103 bits (247), Expect = 4e-21
Identities = 53/122 (43%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Frame = +2
Query: 236 RAVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQXIPXL 415
+ V+T R+RLL+ G SCYRPR+DGERKRK+VRGCI+ +S L V+++KG + I L
Sbjct: 65 QGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKEIDGL 124
Query: 416 TDGNVPRRLGPKRASKIRKLFNLSXXXXXXXXXXXXXLPAXEGKENAKP-RHNAPXIQRL 592
T VPRR GPKRAS +R +F ++ K KP + +P +QRL
Sbjct: 125 TTTAVPRRFGPKRASTLRAMFGITDSKFDASKLVL--------KREVKPGKFTSPKVQRL 176
Query: 593 VT 598
+T
Sbjct: 177 IT 178
Score = 78.2 bits (184), Expect = 2e-13
Identities = 31/66 (46%), Positives = 47/66 (71%)
Frame = +1
Query: 43 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 222
M++ ++YP G Q + ++ D L YEKR+G ++E ++LG ++KGY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 223 FPMKQG 240
FPMKQG
Sbjct: 61 FPMKQG 66
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 97.9 bits (233), Expect = 2e-19
Identities = 47/83 (56%), Positives = 61/83 (73%)
Frame = +2
Query: 236 RAVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQXIPXL 415
+ VL + R RLL+ +G CY RR+GERKRKS+RGCIV +L L++V+V G + +P L
Sbjct: 71 QGVLKSQRARLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGL 130
Query: 416 TDGNVPRRLGPKRASKIRKLFNL 484
TD VP+RL PKRASKIR+LF L
Sbjct: 131 TDVVVPKRLVPKRASKIRRLFGL 153
Score = 62.9 bits (146), Expect = 6e-09
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = +1
Query: 46 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 225
K+N+S P TG K + D K + + RM +E + LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 226 PMKQG 240
PM QG
Sbjct: 68 PMYQG 72
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 93.9 bits (223), Expect = 3e-18
Identities = 44/82 (53%), Positives = 60/82 (73%)
Frame = +2
Query: 242 VLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQXIPXLTD 421
V TN+RVRLL+ + CY+P R+GER+RK+VRG IV ++SVL ++V+KG I +T+
Sbjct: 66 VATNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEIEGVTN 125
Query: 422 GNVPRRLGPKRASKIRKLFNLS 487
+P R GP+RAS RKLFNLS
Sbjct: 126 DALPMRAGPQRASHFRKLFNLS 147
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +1
Query: 46 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGF 225
K+NV+YPATG K F+ +E R F +KR+G EV+A LGDE+KGY+L++ GG DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 226 PMKQG 240
PM G
Sbjct: 61 PMMTG 65
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 93.5 bits (222), Expect = 4e-18
Identities = 54/122 (44%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Frame = +2
Query: 242 VLTNSRVRLLMSKGHSCYRPRR--DGERKRKSVRGCIVDANLSVLALVIVRKGAQXIPXL 415
VL +SRV LL+ +G + R GER+RK+VRGC++ ++++++ + I + G Q I +
Sbjct: 68 VLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGV 127
Query: 416 TDGNVPRRLGPKRASKIRKLFNLSXXXXXXXXXXXXXLPAXEGKENAKPRHNAPXIQRLV 595
TD PRRLGPKRASKIRKLFNLS + K K R AP IQRL+
Sbjct: 128 TDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRRVV----KSGKKDRLKAPKIQRLI 183
Query: 596 TP 601
TP
Sbjct: 184 TP 185
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +1
Query: 43 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 219
MKLN++YP G K FE+ DE R+ + R+G EV+ G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 220 GFPMKQG 240
GFPM G
Sbjct: 61 GFPMVPG 67
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 79.8 bits (188), Expect = 5e-14
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +1
Query: 43 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 180
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 73.7 bits (173), Expect = 3e-12
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = +1
Query: 43 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 222
MK N++ P+TG Q E+ DE KLRI Y K++ ++++ +G EW + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 223 FPMKQG 240
FPMK+G
Sbjct: 61 FPMKEG 66
Score = 54.4 bits (125), Expect = 2e-06
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 242 VLTNSRVRLLMSKGHSCYR--PRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQXIPXL 415
+L+ SRV++L+ KG + R + GER RKSVRGCIV +SVL + ++ + +
Sbjct: 67 ILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVLNIKLLTNKNDDL-LI 125
Query: 416 TDGNVPRRLGPKRASKIRKLFNLSXXXXXXXXXXXXXLPAXEGKENAKPRHNAPXIQRLV 595
T+ N + L KR+S +RK+ L+ + AK N IQRL+
Sbjct: 126 TNKNSEKTLTHKRSSNLRKVLCLTKTDDIRKHYI----------KIAKDFKNKVKIQRLI 175
Query: 596 TPV 604
TP+
Sbjct: 176 TPI 178
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 70.1 bits (164), Expect = 4e-11
Identities = 44/117 (37%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Frame = +2
Query: 245 LTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQXIPXLTDG 424
LT RVR L+SKG + YR RR G R+RKSVRG IV + VL L+I+R G + I LT+
Sbjct: 53 LTKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNA 112
Query: 425 NVPRRLGPKRASKIRKLFNLSXXXXXXXXXXXXXLPA--XEGKENAKPRHNAPXIQR 589
P++ K+RK+F + L + + K+ K RHN ++R
Sbjct: 113 VNDVSHLPRKEKKLRKMFGVPDEEKNVVGYIRNILKSECDDPKKIPKIRHNGKRMKR 169
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/57 (35%), Positives = 39/57 (68%)
Frame = +1
Query: 85 LFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGRPDKQ 255
+FE+ +++R+ Y+K++G + + LG+E++G ++ + GG+D QGFPM G K+
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKK 56
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 52.0 bits (119), Expect = 1e-05
Identities = 33/76 (43%), Positives = 45/76 (59%)
Frame = +2
Query: 257 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQXIPXLTDGNVPR 436
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 437 RLGPKRASKIRKLFNL 484
RLGP R+S I K++ L
Sbjct: 68 RLGPVRSSNISKIYYL 83
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 40.7 bits (91), Expect = 0.030
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 82 KLFEV-VDEHKLRIFYEKRMGAEVEADQLGDEW-KGYVLRVAGGNDKQGFPMKQGRP 246
K F++ ++ R F KR+G V A LG E KG L + GG+D+ GFPM+ P
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIP 189
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 39.5 bits (88), Expect = 0.068
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +2
Query: 188 YFVSLAATTSKDSR*NRAVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSV 367
Y + + T +D R L + R L+ G +RP+ G RKRK VRG ++ ++
Sbjct: 48 YELKITGGTDRDGFPMRPDLPGTARRRLLLSGGVGFRPKEKGLRKRKGVRGRVISKDILQ 107
Query: 368 LALVIVRKG 394
+ V+V+ G
Sbjct: 108 INTVVVKHG 116
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 39.1 bits (87), Expect = 0.090
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 43 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 222
MK+N++ P G Q + DE I K +G +E LG+++ + GG+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 223 FPMKQ 237
F +K+
Sbjct: 60 FLLKK 64
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 39.1 bits (87), Expect = 0.090
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 133 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQ 237
++G E LG KGY LR+ GG+DK GFPMK+
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKE 62
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 37.1 bits (82), Expect = 0.36
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +1
Query: 40 LMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 219
++K+ VS P +G E + L Y K++G ++ ++G + GY L++ GG+D
Sbjct: 6 VVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDIA 60
Query: 220 GFPMKQ 237
GFPM++
Sbjct: 61 GFPMRK 66
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 36.7 bits (81), Expect = 0.48
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 257 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIV 385
RV++L+S+G +RPR GER++K+V G + N+ + + IV
Sbjct: 83 RVKILLSRGPG-FRPRERGERRKKTVHGNTISPNIVQVNMKIV 124
Score = 33.5 bits (73), Expect = 4.5
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Frame = +1
Query: 46 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLG---DEWKGYV------LRV 198
KL +S P G K E+ ++ +R+G E+ A +LG E G L++
Sbjct: 5 KLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADAKLKI 63
Query: 199 AGGNDKQGFPMKQGRPD 249
GG DK GFPM RPD
Sbjct: 64 TGGTDKDGFPM---RPD 77
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 36.3 bits (80), Expect = 0.64
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +2
Query: 257 RVRLLMSKGHSCYRPRRDGERKRKSVRG 340
RVR+L+SKG +RP+ GER++K+VRG
Sbjct: 83 RVRVLLSKGPG-FRPKEKGERRKKTVRG 109
Score = 33.5 bits (73), Expect = 4.5
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Frame = +1
Query: 46 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQL--------GDEWKGYV-LRV 198
KL +S P +G K E+ ++ KR+G ++ A +L G E+ V L +
Sbjct: 5 KLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDVKLEI 63
Query: 199 AGGNDKQGFPMKQGRPD 249
GG DK GFPM RPD
Sbjct: 64 RGGTDKDGFPM---RPD 77
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 33.9 bits (74), Expect = 3.4
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 55 VSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMK 234
V+ P +G FEV D F + +GA V+ +G + GY + + GG+D G PM+
Sbjct: 8 VADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDDAGRPMR 64
Query: 235 Q 237
+
Sbjct: 65 E 65
Score = 33.1 bits (72), Expect = 5.9
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +2
Query: 188 YFVSLAATTSKDSR*NRAVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSV 367
Y V + + R R + S + ++ +G + + P DGERKR +VRG V ++
Sbjct: 48 YTVEITGGSDDAGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRVTVRGKEVSEAVAQ 107
Query: 368 LALVIVRKGAQXIPXL 415
L + I G + + L
Sbjct: 108 LNVAIDEHGEEPVAEL 123
>UniRef50_A6QZZ0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 372
Score = 33.5 bits (73), Expect = 4.5
Identities = 28/74 (37%), Positives = 37/74 (50%)
Frame = -2
Query: 223 ILACRCRQRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGIPLPGTKRLTS 44
I A R + RH++H+P + R P RRP A +E P RT+S P PGT R T
Sbjct: 217 IAATRHQHRHDLHTP-LPRPKFTP--RRPRA--HSFEDNIHPLFRTSSPEPPPGTTRGTV 271
Query: 43 *AAVNPVERQPMKK 2
+PV Q + K
Sbjct: 272 -VTASPVAGQTISK 284
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,764,362
Number of Sequences: 1657284
Number of extensions: 11764144
Number of successful extensions: 30757
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 29726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30732
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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