Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_F04
         (405 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011342-1|AAR96134.1|  265|Drosophila melanogaster RH59487p pro...    28   5.4  
AY118532-1|AAM49901.1|  265|Drosophila melanogaster LD25561p pro...    28   5.4  
AE014296-572|AAF47723.1|  265|Drosophila melanogaster CG12079-PA...    28   5.4  

>BT011342-1|AAR96134.1|  265|Drosophila melanogaster RH59487p
           protein.
          Length = 265

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 342 FFNNSPERREVFTVNLFLVWHEQRRDFV*ISFSDVRY 232
           FF N P+ R + T   F   H QRRDF    + ++RY
Sbjct: 179 FFANHPDLRRILTDYGF-EGHPQRRDFPLSGYVELRY 214


>AY118532-1|AAM49901.1|  265|Drosophila melanogaster LD25561p
           protein.
          Length = 265

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 342 FFNNSPERREVFTVNLFLVWHEQRRDFV*ISFSDVRY 232
           FF N P+ R + T   F   H QRRDF    + ++RY
Sbjct: 179 FFANHPDLRRILTDYGF-EGHPQRRDFPLSGYVELRY 214


>AE014296-572|AAF47723.1|  265|Drosophila melanogaster CG12079-PA
           protein.
          Length = 265

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 342 FFNNSPERREVFTVNLFLVWHEQRRDFV*ISFSDVRY 232
           FF N P+ R + T   F   H QRRDF    + ++RY
Sbjct: 179 FFANHPDLRRILTDYGF-EGHPQRRDFPLSGYVELRY 214


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,909,570
Number of Sequences: 53049
Number of extensions: 222669
Number of successful extensions: 270
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)