Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_F04
         (405 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   1.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   4.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   4.0  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   7.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    20   9.3  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +2

Query: 227 CVYRTSLKLIYTKSRLCSCQTRKRLTVKTSRLSGEL 334
           C Y  +    Y K+    C T KRLT + +    +L
Sbjct: 436 CRYPNASVTPYNKNYTKFCSTEKRLTKQNTAFENQL 471


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 399 LKSPSSTTSRNXH*FLFV 346
           LKS S+T  RN H  +FV
Sbjct: 548 LKSGSNTIERNSHESVFV 565


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 399 LKSPSSTTSRNXH*FLFV 346
           LKS S+T  RN H  +FV
Sbjct: 548 LKSGSNTIERNSHESVFV 565


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 399 LKSPSSTTSRNXH*FLFV 346
           LKS S+T  RN H   FV
Sbjct: 174 LKSGSNTIERNSHESXFV 191


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 112 SHEIRKDVRLENLKSLKLEDAWPFIXDEIE 201
           S E++  +  E LKS KLE++   + +E++
Sbjct: 360 SVELKLALDQEQLKSKKLEESMRKLDEEMK 389


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,455
Number of Sequences: 438
Number of extensions: 1430
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)