Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_E21
(639 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 24 1.2
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 22 5.0
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 22 5.0
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 22 5.0
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 22 5.0
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 21 6.6
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 8.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 475 CRLSTHHYWCSCLWSYEG 528
C+ T HY C C + Y G
Sbjct: 76 CQDHTTHYTCHCPYGYTG 93
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.8 bits (44), Expect = 5.0
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +1
Query: 514 WSYEGCC*RWPQCSSFHQKIPXL*CXIQ 597
WS W CSSF Q+ C I+
Sbjct: 403 WSVNAGMWMWLSCSSFFQQFFHCYCPIK 430
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 21.8 bits (44), Expect = 5.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 237 GLKVTILCALLIHMSCHVMV*RLV*QIMLQHIQLVCY*HEDC 362
G K IL +L ++C VMV + + IQ+V Y + +C
Sbjct: 182 GNKPVILTVVLPLLACGVMVVTHITMAHFKIIQVVPYCYINC 223
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 73 RGTK*NSTRRREGKTDYYARKRLACS 150
RG + NST RR+ + YY R+ S
Sbjct: 114 RGPR-NSTLRRQQMSSYYNESRVMMS 138
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 73 RGTK*NSTRRREGKTDYYARKRLACS 150
RG + NST RR+ + YY R+ S
Sbjct: 114 RGPR-NSTLRRQQMSSYYNESRVMMS 138
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 365 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNK 267
E + +L ++ LNM Q + SH ++ VN+
Sbjct: 301 EQMNLLHSNDLNMHQQHHQQNMSHEELSAMVNR 333
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 21.0 bits (42), Expect = 8.7
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -1
Query: 549 LRPPSTAPFIAPKT 508
L PP++ P ++PK+
Sbjct: 106 LTPPNSEPLVSPKS 119
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -2
Query: 365 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 258
+A + IAD L ML L + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -2
Query: 365 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 258
+A + IAD L ML L + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -2
Query: 365 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 258
+A + IAD L ML L + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -2
Query: 365 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 258
+A + IAD L ML L + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,491
Number of Sequences: 336
Number of extensions: 3216
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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