Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E21
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   250   3e-68
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   4.7  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    23   6.2  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   6.2  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   8.2  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  250 bits (612), Expect = 3e-68
 Identities = 116/165 (70%), Positives = 126/165 (76%)
 Frame = +2

Query: 143 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 322
           + QDKNKYNTPK+RLIVRLSN+D+TCQ+AY RIEGD IVCAAYSHELPRYGVKVGLTNYA
Sbjct: 37  IFQDKNKYNTPKFRLIVRLSNRDITCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYA 96

Query: 323 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 502
           AAY TG                          EY VEPVD GP AF CYLDVGLARTTTG
Sbjct: 97  AAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTG 156

Query: 503 ARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHIFG 637
           +RVFGAMKGAVDGGLN+PHS+KRFP Y A +K FNAE+HR HIFG
Sbjct: 157 SRVFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFG 201



 Score = 45.2 bits (102), Expect = 2e-06
 Identities = 19/20 (95%), Positives = 20/20 (100%)
 Frame = +3

Query: 33 MGFVKVVKNKQYFKRYQVKF 92
          MGFVKVVKNKQYFKRYQV+F
Sbjct: 1  MGFVKVVKNKQYFKRYQVRF 20



 Score = 35.9 bits (79), Expect = 0.001
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +1

Query: 97  RRREGKTDYYARKRL 141
           RRREGKTDYYARKRL
Sbjct: 22  RRREGKTDYYARKRL 36


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 542 HRQQHPS*LQRHEH 501
           H+QQHP   Q H H
Sbjct: 173 HQQQHPGHSQHHHH 186


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 378 LTPYTLAQQMSQVMNTMLNLSTMDQXHL 461
           LTP   + +M Q+  TML ++T    HL
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHL 164


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 272 NKQRTQYGHLQSESRPPGML 213
           +KQ  +Y H   E +PPG L
Sbjct: 152 SKQALKYYHYYLEGQPPGQL 171


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +2

Query: 113 KLIIMLVNASLVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 253
           K I   V   L +D+N  N  KYR +  LSN +       ++   DH
Sbjct: 512 KFITGGVTYFLPKDQNTKNPAKYRPLTCLSNLNKVLSSVITQKVKDH 558


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,751
Number of Sequences: 2352
Number of extensions: 13048
Number of successful extensions: 39
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)