Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E21
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   191   3e-49
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   1.6  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z99284-2|CAL49452.1|  546|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z92796-7|CAB63230.2|  546|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z69788-1|CAA93646.1|  894|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U64845-12|AAC48025.1|  475|Caenorhabditis elegans Hypothetical p...    27   8.6  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  191 bits (466), Expect = 3e-49
 Identities = 94/165 (56%), Positives = 111/165 (67%), Gaps = 1/165 (0%)
 Frame = +2

Query: 146 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 325
           VQDKNKYNTPKYRLIVR++NKDV  Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38  VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97

Query: 326 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV-DNGPXAFXCYLDVGLARTTTG 502
           AY+TG                          +YNVE   D  P  F   LD+GLARTTTG
Sbjct: 98  AYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTG 155

Query: 503 ARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHIFG 637
           +++F  MKG  DGG+NVPHS  RF  +D  SK++NAE HR  I G
Sbjct: 156 SKIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILG 200



 Score = 38.7 bits (86), Expect = 0.003
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +3

Query: 33 MGFVKVVKNKQYFKRYQVK 89
          MG VKV+KNK YFKRYQVK
Sbjct: 1  MGLVKVIKNKAYFKRYQVK 19



 Score = 35.9 bits (79), Expect = 0.024
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +1

Query: 97  RRREGKTDYYARKRL 141
           RRREGKTDYYARKRL
Sbjct: 22  RRREGKTDYYARKRL 36


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -2

Query: 269  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 156
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -2

Query: 269  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 156
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +2

Query: 164 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 283
           YN P+YR +++L  K   C+     + GD++   +CA +  EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588


>Z99284-2|CAL49452.1|  546|Caenorhabditis elegans Hypothetical
           protein H25K10.1 protein.
          Length = 546

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/56 (25%), Positives = 24/56 (42%)
 Frame = -3

Query: 253 MVTFNPRVGHLACYIFVGETHNQTIFRCVIFVLVLNKRGVYEHNNQFSLHDASLNF 86
           M    P   ++   +F G   + +IF  +I    + K GVY  N  +S    + +F
Sbjct: 173 MNVIEPFAAYVPYMVFAGNHESNSIFNHIIHRFTMPKNGVYNDNLFWSFDFGNAHF 228


>Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 311 SDQPSHHNVATHVNKQRTQYGHLQSESRP 225
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical
           protein T23B5.3b protein.
          Length = 540

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 311 SDQPSHHNVATHVNKQRTQYGHLQSESRP 225
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z92796-7|CAB63230.2|  546|Caenorhabditis elegans Hypothetical
           protein H25K10.1 protein.
          Length = 546

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/56 (25%), Positives = 24/56 (42%)
 Frame = -3

Query: 253 MVTFNPRVGHLACYIFVGETHNQTIFRCVIFVLVLNKRGVYEHNNQFSLHDASLNF 86
           M    P   ++   +F G   + +IF  +I    + K GVY  N  +S    + +F
Sbjct: 173 MNVIEPFAAYVPYMVFAGNHESNSIFNHIIHRFTMPKNGVYNDNLFWSFDFGNAHF 228


>Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 311 SDQPSHHNVATHVNKQRTQYGHLQSESRP 225
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z69788-1|CAA93646.1|  894|Caenorhabditis elegans Hypothetical
           protein F09A5.2 protein.
          Length = 894

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 83  SKIQRGVVKGKLIIMLVNASLVQDKNKYNTPKYRLIVR 196
           + + +G+VKGK+ +++VN SL       N   Y   ++
Sbjct: 476 ANVYKGIVKGKIPLLVVNNSLNMTVESENNGHYEAAIK 513


>U64845-12|AAC48025.1|  475|Caenorhabditis elegans Hypothetical
           protein F45F2.1 protein.
          Length = 475

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = -3

Query: 181 IFRCVIFVLVLNKRGVYEHNNQFSLHDASLNFTWYLLKYC 62
           +F+C+   ++LN+  V   N     H+ ++N  + L+  C
Sbjct: 247 VFQCLFKHIILNQEFVISPNRDLMPHEKNINIIFLLVGVC 286


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,003,724
Number of Sequences: 27780
Number of extensions: 279425
Number of successful extensions: 707
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)