Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E20
         (378 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   1.2  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    22   8.6  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +1

Query: 205 VSVWEDNWEDDVIQDDFNQQLR 270
           +  W++ W+ D +Q D ++  R
Sbjct: 934 IDCWQEEWDADALQQDASRHTR 955


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +1

Query: 163  PRQNWGTEDADDEXVSVWEDNWEDDVIQDDFNQQLRQQLE 282
            P+  W  ED +DE  ++   +    ++    N+Q    LE
Sbjct: 1049 PKPQWDEEDLEDEQKAIGRRDTIHRILYQHKNKQDWSNLE 1088


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,665
Number of Sequences: 2352
Number of extensions: 4207
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)