Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E20
         (378 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070697-1|AAL48168.1|   79|Drosophila melanogaster RH34416p pro...    55   3e-08
AE014134-1237|AAF52481.1|   79|Drosophila melanogaster CG13779-P...    55   3e-08
L07065-1|AAA16186.1| 1283|Drosophila melanogaster P-glycoprotein...    28   4.6  

>AY070697-1|AAL48168.1|   79|Drosophila melanogaster RH34416p
           protein.
          Length = 79

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 22/46 (47%), Positives = 34/46 (73%)
 Frame = +1

Query: 154 KNFPRQNWGTEDADDEXVSVWEDNWEDDVIQDDFNQQLRQQLEKLK 291
           + FP +++   D D+E ++VWEDNW+DD ++DDF+QQL+  LE  K
Sbjct: 32  EEFPAEDFRVGD-DEEELNVWEDNWDDDNVEDDFSQQLKAHLESKK 76


>AE014134-1237|AAF52481.1|   79|Drosophila melanogaster CG13779-PA
           protein.
          Length = 79

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 22/46 (47%), Positives = 34/46 (73%)
 Frame = +1

Query: 154 KNFPRQNWGTEDADDEXVSVWEDNWEDDVIQDDFNQQLRQQLEKLK 291
           + FP +++   D D+E ++VWEDNW+DD ++DDF+QQL+  LE  K
Sbjct: 32  EEFPAEDFRVGD-DEEELNVWEDNWDDDNVEDDFSQQLKAHLESKK 76


>L07065-1|AAA16186.1| 1283|Drosophila melanogaster
           P-glycoprotein/multidrug resistanceprotein protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 11/42 (26%), Positives = 28/42 (66%)
 Frame = +1

Query: 169 QNWGTEDADDEXVSVWEDNWEDDVIQDDFNQQLRQQLEKLKD 294
           +N+  +D D+E + V  ++ ++DV+  D  +  +++++K+KD
Sbjct: 655 KNFDIKDEDEEEIKVLSEDEDEDVMVTD-EKNKKKKMKKVKD 695


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,707,694
Number of Sequences: 53049
Number of extensions: 176273
Number of successful extensions: 525
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)