Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_E20
(378 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006714-3|AAK29724.3| 82|Caenorhabditis elegans Hypothetical ... 50 7e-07
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 27 3.4
AF039053-11|AAC25879.1| 301|Caenorhabditis elegans Serpentine r... 27 4.5
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 27 5.9
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 27 5.9
>AC006714-3|AAK29724.3| 82|Caenorhabditis elegans Hypothetical
protein Y119D3B.15 protein.
Length = 82
Score = 49.6 bits (113), Expect = 7e-07
Identities = 17/45 (37%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +1
Query: 154 KNFPRQNWGTE-DADDEXVSVWEDNWEDDVIQDDFNQQLRQQLEK 285
+ FP Q W + +++ V+VWEDNW+D+ + +F++QL+++L K
Sbjct: 32 EEFPVQEWAERAEGEEDDVNVWEDNWDDETHESEFSKQLKEELRK 76
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 97 NG*QTESXPCVCXKRMTSSKNFPRQNWGTEDADDEXVSVWEDNWEDDV-IQDDFNQQLRQ 273
NG P V +T ++ P + +ED D+ ++ +D W +V DDF QL
Sbjct: 378 NGQVVVRDPVVLEPSVTEQED-PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-G 435
Query: 274 QLEKLKDQK 300
++ ++QK
Sbjct: 436 SIDNTQNQK 444
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 97 NG*QTESXPCVCXKRMTSSKNFPRQNWGTEDADDEXVSVWEDNWEDDV-IQDDFNQQLRQ 273
NG P V +T ++ P + +ED D+ ++ +D W +V DDF QL
Sbjct: 378 NGQVVVRDPVVLEPSVTEQED-PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-G 435
Query: 274 QLEKLKDQK 300
++ ++QK
Sbjct: 436 SIDNTQNQK 444
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 97 NG*QTESXPCVCXKRMTSSKNFPRQNWGTEDADDEXVSVWEDNWEDDV-IQDDFNQQLRQ 273
NG P V +T ++ P + +ED D+ ++ +D W +V DDF QL
Sbjct: 378 NGQVVVRDPVVLEPSVTEQED-PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-G 435
Query: 274 QLEKLKDQK 300
++ ++QK
Sbjct: 436 SIDNTQNQK 444
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 97 NG*QTESXPCVCXKRMTSSKNFPRQNWGTEDADDEXVSVWEDNWEDDV-IQDDFNQQLRQ 273
NG P V +T ++ P + +ED D+ ++ +D W +V DDF QL
Sbjct: 378 NGQVVVRDPVVLEPSVTEQED-PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-G 435
Query: 274 QLEKLKDQK 300
++ ++QK
Sbjct: 436 SIDNTQNQK 444
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 97 NG*QTESXPCVCXKRMTSSKNFPRQNWGTEDADDEXVSVWEDNWEDDV-IQDDFNQQLRQ 273
NG P V +T ++ P + +ED D+ ++ +D W +V DDF QL
Sbjct: 378 NGQVVVRDPVVLEPSVTEQED-PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-G 435
Query: 274 QLEKLKDQK 300
++ ++QK
Sbjct: 436 SIDNTQNQK 444
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 97 NG*QTESXPCVCXKRMTSSKNFPRQNWGTEDADDEXVSVWEDNWEDDV-IQDDFNQQLRQ 273
NG P V +T ++ P + +ED D+ ++ +D W +V DDF QL
Sbjct: 378 NGQVVVRDPVVLEPSVTEQED-PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-G 435
Query: 274 QLEKLKDQK 300
++ ++QK
Sbjct: 436 SIDNTQNQK 444
>AF039053-11|AAC25879.1| 301|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 19 protein.
Length = 301
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 121 VYFLFVSHYTVMIIEIRKYH 62
VY LFV Y+++ E+RKYH
Sbjct: 63 VYLLFVIAYSLIPEELRKYH 82
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 220 DNWEDDVIQDDFNQQLRQQLEKLKDQK 300
D +DDV DD + + R+Q +LK QK
Sbjct: 664 DEEDDDVASDDPDAEKRRQKRRLKRQK 690
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +1
Query: 157 NFPRQNWGTEDADDEXVSVWEDNWEDDV-----IQDDFNQQLRQQLEKLKDQ 297
+F ++N D +DE + +DN DDV + D N+ +R ++++D+
Sbjct: 1540 DFNKENTFDYDDEDEFAGIADDNVTDDVTVRNEVDDSDNETIRHIDDEVQDE 1591
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,230,918
Number of Sequences: 27780
Number of extensions: 96095
Number of successful extensions: 312
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 311
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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