Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E19
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.3  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.5  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   9.9  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 253 DVKLNMPLSFKYFKP 209
           DVK+ +P  F ++KP
Sbjct: 489 DVKIFLPFRFLFYKP 503



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 190 QHNLLFVKFNVEYCTDNISCPNVYFLSYTECVENP 86
           +  LL  +FN+    D I+ PN  ++ +    +NP
Sbjct: 630 RRGLLHRQFNLPPSKDTIAVPNNGYVIFRFRADNP 664


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 237 CLFPLNILNQWCNHNTST 184
           CLF +N+L + C  + +T
Sbjct: 503 CLFCINVLAEACGSDITT 520


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -1

Query: 130 PNVYFLSYTECVENPCP 80
           P ++ L Y  CV  P P
Sbjct: 45  PVIHVLQYPGCVPKPIP 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,237
Number of Sequences: 336
Number of extensions: 2802
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)