Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E19
         (577 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0359 + 2829325-2832076,2832223-2832593,2833335-2833695,283...    30   1.5  
12_01_0527 - 4177928-4178235,4178849-4181438                           29   2.7  
02_02_0450 - 10381360-10381391,10381737-10382283,10382770-103829...    28   6.1  
12_01_0984 - 9985300-9985804,9985894-9986933                           27   8.1  
08_01_0217 + 1738321-1739104,1739683-1739915,1740002-1740292,174...    27   8.1  
04_03_0353 - 14785648-14787213                                         27   8.1  

>01_01_0359 + 2829325-2832076,2832223-2832593,2833335-2833695,
            2833799-2833868,2834021-2834108,2834325-2834580,
            2834758-2834883,2835217-2835425
          Length = 1410

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 411  DLTDFSWTRELLWHNLIELFGTGIS 485
            D TD S TR ++  +L+ LFG GIS
Sbjct: 987  DATDASMTRGIIQQSLVSLFGLGIS 1011


>12_01_0527 - 4177928-4178235,4178849-4181438
          Length = 965

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
 Frame = +3

Query: 48  PSTFLTYKHFRGHGFSTHSVYDKKYTFGQEILSVQYSTLNFTKSKLCWYY------GYTI 209
           PST    +   GH  + +S++     F + + +V   +  F K++ C YY      G T 
Sbjct: 656 PSTEDVARIINGHLITMNSIHTSAIDFVKAMEAVSNHSNIFLKTRFCTYYKAVMPNGSTY 715

Query: 210 GLKYLK-ERGIFSLTSNTKVQNFIQNVXKI 296
            LK +     IF + S  KV + ++ + K+
Sbjct: 716 SLKQINCSDKIFQIGSQGKVAHELEVLGKL 745


>02_02_0450 -
           10381360-10381391,10381737-10382283,10382770-10382952,
           10383123-10383863
          Length = 500

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 69  KHFRGHGFSTHSVYDKKYTFG 131
           K  +G    T+S++D+KYTFG
Sbjct: 393 KRMKGMEVDTNSIHDEKYTFG 413


>12_01_0984 - 9985300-9985804,9985894-9986933
          Length = 514

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -1

Query: 466 SSIKLCHRSSRVQEKSVKSSL 404
           SS+KLC+   R  E+++KSSL
Sbjct: 292 SSLKLCYHDMRTYEEALKSSL 312


>08_01_0217 +
           1738321-1739104,1739683-1739915,1740002-1740292,
           1740524-1740616,1740912-1741040,1741522-1741695,
           1741883-1741990,1742073-1742279
          Length = 672

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 470 KKFNQIMP*KFSSPRKICQIFSCLINTY 387
           +KFN   P K+S   K CQ + CL N Y
Sbjct: 618 EKFNSTSPVKYSHSWKFCQ-YGCLENYY 644


>04_03_0353 - 14785648-14787213
          Length = 521

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 186 CWYYGYTIGLKYLKERGIFSLTSNTKVQNFI 278
           C + GY    K+L +RG+F L S + + NF+
Sbjct: 160 CGFMGY-YHYKHLLDRGLFPLKSRSSMANFL 189


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,517,467
Number of Sequences: 37544
Number of extensions: 215280
Number of successful extensions: 347
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 347
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)