Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E19
         (577 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061512-1|AAL29060.2|  306|Drosophila melanogaster LD46714p pro...    54   1e-07
AE014296-1424|AAF50441.1|  281|Drosophila melanogaster CG7081-PA...    54   1e-07

>AY061512-1|AAL29060.2|  306|Drosophila melanogaster LD46714p
           protein.
          Length = 306

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 2/144 (1%)
 Frame = +3

Query: 102 SVYDKKYTFGQEILSVQYSTLNFTKSKLCWYYGYTIGLKYLKERGIFSLTSNTK-VQNFI 278
           SV  +  TFGQ++L + Y     T S+L  ++  T+   Y+K      LT   +     I
Sbjct: 86  SVGKRCSTFGQQLLVLAYDAEKLTVSRLVLHFILTVLPGYVKSWEERRLTRRVEWFSEAI 145

Query: 279 QNVXKIXLLSEVLNFLRFIQSGKHPXXXXXXXXXXXXGV-NQTREDLTDFSWTRELLWHN 455
             V    L+  +LN+ RF+++G+ P             + N  R D+     TRELLW  
Sbjct: 146 MWVENSALILNILNYFRFLKTGRKPTLVDYLLGLDYISLRNNQRRDIGYKYLTRELLWGG 205

Query: 456 LIELFGTGISLFNIIGLKQRLSKF 527
            +E+ G  + + N   L++ L  +
Sbjct: 206 FMEILGLVLPIINFRKLQRVLKSW 229


>AE014296-1424|AAF50441.1|  281|Drosophila melanogaster CG7081-PA
           protein.
          Length = 281

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 2/144 (1%)
 Frame = +3

Query: 102 SVYDKKYTFGQEILSVQYSTLNFTKSKLCWYYGYTIGLKYLKERGIFSLTSNTK-VQNFI 278
           SV  +  TFGQ++L + Y     T S+L  ++  T+   Y+K      LT   +     I
Sbjct: 61  SVGKRCSTFGQQLLVLAYDAEKLTVSRLVLHFILTVLPGYVKSWEERRLTRRVEWFSEAI 120

Query: 279 QNVXKIXLLSEVLNFLRFIQSGKHPXXXXXXXXXXXXGV-NQTREDLTDFSWTRELLWHN 455
             V    L+  +LN+ RF+++G+ P             + N  R D+     TRELLW  
Sbjct: 121 MWVENSALILNILNYFRFLKTGRKPTLVDYLLGLDYISLRNNQRRDIGYKYLTRELLWGG 180

Query: 456 LIELFGTGISLFNIIGLKQRLSKF 527
            +E+ G  + + N   L++ L  +
Sbjct: 181 FMEILGLVLPIINFRKLQRVLKSW 204


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,095,143
Number of Sequences: 53049
Number of extensions: 403449
Number of successful extensions: 818
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)