Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E19
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68753-7|CAA92987.1|  240|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AF077545-2|AAC26305.3|  356|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z68753-7|CAA92987.1|  240|Caenorhabditis elegans Hypothetical
           protein ZC518.4 protein.
          Length = 240

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +3

Query: 276 IQNVXKIXLLSEVLNFLRFIQSGK 347
           IQN  +I ++   ++FL+F+QSGK
Sbjct: 55  IQNELRIWIIKRGVDFLQFLQSGK 78


>AF077545-2|AAC26305.3|  356|Caenorhabditis elegans Hypothetical
           protein H41C03.2 protein.
          Length = 356

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +3

Query: 426 SWTRELLWHNLIELF-GTGISLFNIIGLKQRLSKF-LKYVWWNKPV 557
           S T E   HN  E+F G+ +++ N     Q  +++ LK  WW KPV
Sbjct: 292 SQTIETAHHNSFEIFYGSHMAVDNYKICNQPETEYCLKGSWWKKPV 337


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,125,945
Number of Sequences: 27780
Number of extensions: 234336
Number of successful extensions: 520
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)