Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E19
         (577 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    23   1.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.7  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   8.7  

>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 130 PNVYFLSYTECVENPCP 80
           P ++FL Y  CV  P P
Sbjct: 33  PVIHFLQYPGCVPKPIP 49


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 538 TYFKNFESLCFKPIILKSDIPVPKSSIK 455
           TYF +FES+    + ++S      + IK
Sbjct: 460 TYFDHFESMLNNGVSIQSHAKAKNTMIK 487


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 538 TYFKNFESLCFKPIILKSDIPVPKSSIK 455
           TYF +FES+    + ++S      + IK
Sbjct: 460 TYFDHFESMLNNGVSIQSHAKAKNTMIK 487


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 48  PSTFLTYKHFRGHGFS 95
           PST +  +H RG+ FS
Sbjct: 304 PSTRINKQHTRGNNFS 319


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 538 TYFKNFESLCFKPIILKSDIPVPKSSIK 455
           TYF +FES+    + ++S      + IK
Sbjct: 86  TYFDHFESMLNNGVSIQSHAKAKNTMIK 113


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,255
Number of Sequences: 438
Number of extensions: 2987
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)