Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E16
         (513 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00005867C2 Cluster: PREDICTED: similar to MGC84305 p...    46   4e-04
UniRef50_UPI0000D554F6 Cluster: PREDICTED: hypothetical protein;...    45   0.001
UniRef50_Q6AXK4 Cluster: Zgc:100909; n=4; Clupeocephala|Rep: Zgc...    37   0.23 
UniRef50_Q9NWV8 Cluster: Uncharacterized protein C19orf62; n=24;...    37   0.23 
UniRef50_Q7R058 Cluster: GLP_56_49352_48375; n=1; Giardia lambli...    32   6.7  
UniRef50_Q02Z72 Cluster: Lysyl-tRNA synthetase; n=3; Lactococcus...    32   8.8  
UniRef50_Q4PHR6 Cluster: Putative uncharacterized protein; n=1; ...    32   8.8  

>UniRef50_UPI00005867C2 Cluster: PREDICTED: similar to MGC84305
           protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to MGC84305 protein -
           Strongylocentrotus purpuratus
          Length = 338

 Score = 46.4 bits (105), Expect = 4e-04
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = +2

Query: 323 PNLPNVNVPXKIIVCLDVCYDNPNSLYRFGDGTTFSPINMLXRILDFFFHTK 478
           P LP VN P KII+CLD+  +     +   DGT   PI ++ R L  F  TK
Sbjct: 105 PRLPGVNCPEKIIICLDLASEVNRVPFLQRDGTKHLPIELVKRALSMFIRTK 156


>UniRef50_UPI0000D554F6 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 248

 Score = 44.8 bits (101), Expect = 0.001
 Identities = 22/59 (37%), Positives = 31/59 (52%)
 Frame = +2

Query: 320 KPNLPNVNVPXKIIVCLDVCYDNPNSLYRFGDGTTFSPINMLXRILDFFFHTKHASAXK 496
           K  LP  N P KII+ +D   D+  + +R  +  T +P NML R +D F H K   + K
Sbjct: 32  KRTLPMANCPEKIILVVDSVEDDNFTPFRVSNSETVTPFNMLKRAVDMFLHRKSLFSKK 90


>UniRef50_Q6AXK4 Cluster: Zgc:100909; n=4; Clupeocephala|Rep:
           Zgc:100909 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 396

 Score = 37.1 bits (82), Expect = 0.23
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +2

Query: 332 PNVNVPXKIIVCLDVCYDNPNSLYRFGDGTTFSPINMLXRILDFFFHTKH 481
           P VN P K+I+CLD+  +         +G+  + +N+  ++++ F  TKH
Sbjct: 129 PRVNCPEKVIICLDLSEEMSLQKLESINGSKTNALNISQKMIEMFVRTKH 178


>UniRef50_Q9NWV8 Cluster: Uncharacterized protein C19orf62; n=24;
           Tetrapoda|Rep: Uncharacterized protein C19orf62 - Homo
           sapiens (Human)
          Length = 329

 Score = 37.1 bits (82), Expect = 0.23
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +2

Query: 332 PNVNVPXKIIVCLDVCYDNPNSLYRFGDGTTFSPINMLXRILDFFFHTKH 481
           P VN P K+I+CLD+  +         +G+  + +N+  ++++ F  TKH
Sbjct: 87  PRVNCPEKVIICLDLSEEMSLPKLESFNGSKTNALNVSQKMIEMFVRTKH 136


>UniRef50_Q7R058 Cluster: GLP_56_49352_48375; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_56_49352_48375 - Giardia lamblia
           ATCC 50803
          Length = 325

 Score = 32.3 bits (70), Expect = 6.7
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +2

Query: 248 YEXTSVLENEXVKEIQEQVLANLEK--PNLPNVNVPXKIIVCLDVCYDNPNSLYRFGDGT 421
           YE     + +   +I E +   L K  PN+P+ NV  +I + L  C  + +S   +GD T
Sbjct: 117 YELVVAYKQQYFSDITEDIYEILRKLSPNIPDSNVVSRIFISLLSCARDDDSFDDYGDVT 176


>UniRef50_Q02Z72 Cluster: Lysyl-tRNA synthetase; n=3; Lactococcus
           lactis|Rep: Lysyl-tRNA synthetase - Lactococcus lactis
           subsp. cremoris (strain SK11)
          Length = 917

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
 Frame = +2

Query: 374 VCYDNPNSL----YRFGDGTTFSPINMLXRILDFFFH 472
           +CYDN  SL    +  G    F P N+  +I  FFFH
Sbjct: 569 ICYDNGGSLTSVLFTIGQAEGFVPTNISSKIKGFFFH 605


>UniRef50_Q4PHR6 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 1224

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 19/82 (23%), Positives = 37/82 (45%)
 Frame = +2

Query: 257 TSVLENEXVKEIQEQVLANLEKPNLPNVNVPXKIIVCLDVCYDNPNSLYRFGDGTTFSPI 436
           +S+L +           A L  P++P  +V  K++  LD   D+P+ L  + +     P+
Sbjct: 34  SSLLSSTSSASAFSSARAALVTPSIPADDVLTKLVAILDEYQDHPHLLDPYLERIVSPPV 93

Query: 437 NMLXRILDFFFHTKHASAXKLI 502
             L R + +  ++ H S   L+
Sbjct: 94  ESLQRHVRYATNSYHGSTANLL 115


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,783,190
Number of Sequences: 1657284
Number of extensions: 7393979
Number of successful extensions: 14558
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14551
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)