Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E16
         (513 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    25   0.30 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.9  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 25.4 bits (53), Expect = 0.30
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 312 FARTCSCISLTXSFSRTDVXSY-CLESLSDAPCELLEDTVSGL 187
           F    +CIS+  +   TD   Y CL  + +  CE++ DT+  L
Sbjct: 169 FILAFACISIAYTNVSTDAFFYTCLIQI-ETQCEIVSDTLRNL 210


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = +3

Query: 186 KVLRQYLLVTHMEHQTVIQDNMXIRLSSR 272
           +++   +LVTH E QT+    + ++++S+
Sbjct: 221 EIIHNEILVTHNEIQTIFSVPLLMKIASQ 249


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = +3

Query: 186 KVLRQYLLVTHMEHQTVIQDNMXIRLSSR 272
           +++   +LVTH E QT+    + ++++S+
Sbjct: 46  EIIHNEILVTHNEIQTIFSVPLLMKIASQ 74


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 478 FCMKKEIKYSXQHIDWRKC 422
           F  K E K+  +HID R C
Sbjct: 648 FYRKAEGKFVPEHIDQRLC 666


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 202 YCLRTFHYLKCMYYNIY 152
           + + T H+L C YY  Y
Sbjct: 89  FIIFTVHFLLCTYYFYY 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,816
Number of Sequences: 336
Number of extensions: 2080
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)