Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E16
         (513 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533526-1|CAG38557.1|  329|Homo sapiens HSPC142 protein.              37   0.036
BC091491-1|AAH91491.1|  329|Homo sapiens chromosome 19 open read...    37   0.036
BC006244-1|AAH06244.1|  329|Homo sapiens HSPC142 protein protein.      37   0.036
BC000788-1|AAH00788.1|  329|Homo sapiens HSPC142 protein protein.      37   0.036
AK000578-1|BAA91268.1|  329|Homo sapiens protein ( Homo sapiens ...    37   0.036

>CR533526-1|CAG38557.1|  329|Homo sapiens HSPC142 protein.
          Length = 329

 Score = 37.1 bits (82), Expect = 0.036
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +2

Query: 332 PNVNVPXKIIVCLDVCYDNPNSLYRFGDGTTFSPINMLXRILDFFFHTKH 481
           P VN P K+I+CLD+  +         +G+  + +N+  ++++ F  TKH
Sbjct: 87  PRVNCPEKVIICLDLSEEMSLPKLESFNGSKTNALNVSQKMIEMFVRTKH 136


>BC091491-1|AAH91491.1|  329|Homo sapiens chromosome 19 open reading
           frame 62 protein.
          Length = 329

 Score = 37.1 bits (82), Expect = 0.036
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +2

Query: 332 PNVNVPXKIIVCLDVCYDNPNSLYRFGDGTTFSPINMLXRILDFFFHTKH 481
           P VN P K+I+CLD+  +         +G+  + +N+  ++++ F  TKH
Sbjct: 87  PRVNCPEKVIICLDLSEEMSLPKLESFNGSKTNALNVSQKMIEMFVRTKH 136


>BC006244-1|AAH06244.1|  329|Homo sapiens HSPC142 protein protein.
          Length = 329

 Score = 37.1 bits (82), Expect = 0.036
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +2

Query: 332 PNVNVPXKIIVCLDVCYDNPNSLYRFGDGTTFSPINMLXRILDFFFHTKH 481
           P VN P K+I+CLD+  +         +G+  + +N+  ++++ F  TKH
Sbjct: 87  PRVNCPEKVIICLDLSEEMSLPKLESFNGSKTNALNVSQKMIEMFVRTKH 136


>BC000788-1|AAH00788.1|  329|Homo sapiens HSPC142 protein protein.
          Length = 329

 Score = 37.1 bits (82), Expect = 0.036
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +2

Query: 332 PNVNVPXKIIVCLDVCYDNPNSLYRFGDGTTFSPINMLXRILDFFFHTKH 481
           P VN P K+I+CLD+  +         +G+  + +N+  ++++ F  TKH
Sbjct: 87  PRVNCPEKVIICLDLSEEMSLPKLESFNGSKTNALNVSQKMIEMFVRTKH 136


>AK000578-1|BAA91268.1|  329|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20571 fis, clone REC01040. ).
          Length = 329

 Score = 37.1 bits (82), Expect = 0.036
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +2

Query: 332 PNVNVPXKIIVCLDVCYDNPNSLYRFGDGTTFSPINMLXRILDFFFHTKH 481
           P VN P K+I+CLD+  +         +G+  + +N+  ++++ F  TKH
Sbjct: 87  PRVNCPEKVIICLDLSEEMSLPKLESFNGSKTNALNVSQKMIEMFVRTKH 136


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,124,561
Number of Sequences: 237096
Number of extensions: 1084495
Number of successful extensions: 2163
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2157
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)