Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E16
         (513 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071333-1|AAL48955.1|  602|Drosophila melanogaster RE35228p pro...    28   6.5  
AY060926-1|AAL28474.1|  602|Drosophila melanogaster GM06687p pro...    28   6.5  
AE014298-1569|AAF48009.1|  602|Drosophila melanogaster CG1908-PA...    28   6.5  

>AY071333-1|AAL48955.1|  602|Drosophila melanogaster RE35228p
           protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 431 EKMLCHHQNGIENLDCHSKHLSRQL 357
           E M CH  +G+ ++DCH    +RQL
Sbjct: 558 EAMYCHLCSGLYHMDCHEFTKNRQL 582


>AY060926-1|AAL28474.1|  602|Drosophila melanogaster GM06687p
           protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 431 EKMLCHHQNGIENLDCHSKHLSRQL 357
           E M CH  +G+ ++DCH    +RQL
Sbjct: 558 EAMYCHLCSGLYHMDCHEFTKNRQL 582


>AE014298-1569|AAF48009.1|  602|Drosophila melanogaster CG1908-PA
           protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 431 EKMLCHHQNGIENLDCHSKHLSRQL 357
           E M CH  +G+ ++DCH    +RQL
Sbjct: 558 EAMYCHLCSGLYHMDCHEFTKNRQL 582


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,395,905
Number of Sequences: 53049
Number of extensions: 340243
Number of successful extensions: 534
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)