Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E16
         (513 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   5.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   5.7  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   7.5  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   7.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.5  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 65  MYRIFQLIRT*NLVPIGFKPELQ 133
           M R+ + +RT + +P GFK  +Q
Sbjct: 745 MERLAEAVRTASQIPQGFKDLVQ 767


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 509 SSKSVXLLMHVLYEKRNQVFXSTY*LEKMLCH 414
           S++ V + +  L  K  + F +   LEK+LC+
Sbjct: 80  SNEVVAVALGALLSKGEESFPTARSLEKLLCN 111


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -3

Query: 481 MFCMKKEIKYSXQHIDWRKC 422
           ++ + K ++    +IDW KC
Sbjct: 95  LYGLTKNLEIKNYNIDWDKC 114


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 353 KIIVCLDVCYDNPNSLYRFGDGTTFSPIN 439
           K I+C   C    N+L R  DG+  +  N
Sbjct: 74  KSIICKCFCKRRTNTLRRGSDGSQLAMRN 102


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 353 KIIVCLDVCYDNPNSLYRFGDGTTFSPIN 439
           K I+C   C    N+L R  DG+  +  N
Sbjct: 522 KSIICKCFCKRRTNTLRRGSDGSQLAMRN 550


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,331
Number of Sequences: 438
Number of extensions: 2756
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)