Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_E14
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 28 1.0
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 27 2.4
SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces p... 27 3.1
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 27 3.1
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 27 3.1
SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces pomb... 26 4.1
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 26 4.1
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 26 4.1
SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces ... 26 4.1
SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid transporter|Schizo... 26 5.5
SPAC7D4.06c |alg3||dolichol-P-Man dependent alpha|Schizosaccharo... 26 5.5
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 25 7.2
SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces pombe... 25 7.2
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 25 9.5
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 276 FNSFALSEQDPESRSSKTIAAAFGSN 353
F S LS +P+S+S K I AA GSN
Sbjct: 330 FKSLRLSYLEPKSQSEKGIRAATGSN 355
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 27.1 bits (57), Expect = 2.4
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +3
Query: 417 KLVNSQIYLXKISTXI-----LIXKINLFESDDSKNDKSLLKTFLQQPQLDHKDIMGMMV 581
K +NS+ + K I L + + E KND L +L + I G+M+
Sbjct: 40 KSINSKAFSFKNQDQIYGAGSLKSRFSTHEISSEKNDSPDFTLVLPSNRL-YIVIPGLML 98
Query: 582 DILMAAIDTTAYTTS 626
I +AA+D T TT+
Sbjct: 99 SIFLAALDQTVITTA 113
>SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 535
Score = 26.6 bits (56), Expect = 3.1
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 249 IGVVAFNERFNSFALSEQDPESRSSKTIAAAFGSNSGVMKLDK-GFLWKMFSTPLYKKLV 425
IGV A++ +N+ AL+ ++ IAA + N K DK L + + L+K +
Sbjct: 59 IGVYAWDRVYNAHALTRSIRTVYTASIIAADYKLNFSEKKADKIDALHQRVAQRLFKTIY 118
Query: 426 -NSQIYLXKISTXILIXKINLFES 494
N +Y+ K+ I + NL E+
Sbjct: 119 KNGGLYI-KMGQIIAMQSNNLPEA 141
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 204 YPIIGTLHKYLPLIVIGVVAFNERFN-SFALS 296
YP +G YLP ++G V + + S+ALS
Sbjct: 643 YPFLGWFFNYLPYYIMGRVLYVHHYEPSYALS 674
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 456 TXILIXKINLFESDDSKNDKSLLKTFLQQPQLDHKDIMGMMVDILMAAIDTTAYTTS 626
T L + + E+ K+D S L ++ + I G+M+ I ++A+D T TT+
Sbjct: 58 TSSLKSRFSTHEASSEKDDSSDFTLVLPSNRM-YIVIPGLMLSIFLSALDQTVITTA 113
>SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 933
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +3
Query: 498 DSKNDKSLLKTFLQQPQLDHKDIMGMMVDILMAAIDTTAYTTSFVLYHI 644
D++ LL +L+ DH + + ++ A D + S +LYH+
Sbjct: 669 DTERTTGLLDLYLRLIPFDHDSLQKLYLEGAREADDDGRFGDSIILYHL 717
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 60 LKIIFPTGRGNVFTEERLKILWVVNMPVRSMNRADNLMNFEDIPGPRSYPIIGTLHKYLP 239
L +++PT + ++E + +W+VN P+ S+++ +N S L +Y P
Sbjct: 478 LDLLYPT----LASDEVRQNIWLVNSPLSSVHQLREALNHS------SSVTKEVLSQYTP 527
Query: 240 LIVIGVV 260
+VIGV+
Sbjct: 528 SVVIGVL 534
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = +3
Query: 222 LHKYLPLIVIGVVAFNERFNSFA-----LSEQDPESRSSKTIAAAFGSNSGVMKLDKGFL 386
L K+ P + I V+ +E+ S ++++DP+ S+ + + + + L + F
Sbjct: 623 LKKWAPFLQINVLVGSEKNRSLVRDYRLINQKDPKHVSTHVLVISASNVEREISLLRKFQ 682
Query: 387 WKMFSTPLYKKLVNSQ 434
WK+ ++L N Q
Sbjct: 683 WKVLIVDEGQRLKNDQ 698
>SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 495
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 540 QPQLDHKDIMGMMVDILMAAIDTTAYTTSFVL 635
+P +H +I GMM+ +LMA T+A T +VL
Sbjct: 271 RPLKEH-EIAGMMIALLMAGQHTSAATIVWVL 301
>SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 594
Score = 25.8 bits (54), Expect = 5.5
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Frame = +3
Query: 420 LVNSQIYLXKISTXIL----IXKINLFESDDSKNDKSL 521
LVNSQ+Y+ + ST L + K NL +S+D+KN + L
Sbjct: 538 LVNSQMYVAESSTSELSEKDLTKPNL-QSNDNKNSEDL 574
>SPAC7D4.06c |alg3||dolichol-P-Man dependent
alpha|Schizosaccharomyces pombe|chr 1|||Manual
Length = 406
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 207 PIIGTLHKYLPLIVIGVVAFNERFNSFALSEQDPES 314
P + + +P I +A+ E+ NSF L E+D +S
Sbjct: 36 PFVFAIISKVPYTEIDWIAYMEQVNSFLLGERDYKS 71
>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
Wis1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 605
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +3
Query: 198 RSYPIIGTLHKYLPLIVIGVVAFNERFNSFALSEQDPESRSSKTIAAAFGSNS 356
R P L + +P + +G + NS L +DP + +++ A G N+
Sbjct: 74 REIPSDPPLPRAVPTVRLGRSTSSRSRNSLNLDMKDPSEKPRRSLPTAAGQNN 126
>SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -1
Query: 636 TIRSLSCRLLYRLQPLEYQPSFP*YPCDPAGVVEEMFLTKIYRFYYHRI 490
T++SLSC R++PL P D V E F K+YR ++I
Sbjct: 602 TLQSLSCA---RIRPLVMVPKSKKPSPDTMFYVNEKFTDKLYRVKINQI 647
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 9.5
Identities = 22/92 (23%), Positives = 37/92 (40%)
Frame = +3
Query: 87 GNVFTEERLKILWVVNMPVRSMNRADNLMNFEDIPGPRSYPIIGTLHKYLPLIVIGVVAF 266
GNV+ +R+ I + +MP + N + P SYP + +P +
Sbjct: 697 GNVYPHDRVMINYGSSMPTANGFYVPNTYSPVPFPYNTSYPPYMSPTSNMPQAFQAYSQY 756
Query: 267 NERFNSFALSEQDPESRSSKTIAAAFGSNSGV 362
+ F LSEQ +S + A + SG+
Sbjct: 757 PYQHPPFPLSEQMLPLPTSGVMMAPGAAKSGM 788
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,577,225
Number of Sequences: 5004
Number of extensions: 52396
Number of successful extensions: 127
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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