Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E14
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0685 - 19875801-19875980,19876074-19876277,19876392-198767...    31   1.1  
12_01_0629 - 5183504-5184970                                           29   2.4  
04_04_0867 + 28865857-28866657,28866778-28867113,28867248-288674...    29   3.2  
09_04_0476 - 17922072-17922469,17922546-17923241,17923405-179235...    28   7.5  
07_01_0827 - 6664723-6665346,6666636-6667559                           28   7.5  

>10_08_0685 -
           19875801-19875980,19876074-19876277,19876392-19876724,
           19876834-19877115,19877210-19877425,19879752-19880024
          Length = 495

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
 Frame = +3

Query: 483 LFESDDSKNDKSLLKTFLQQPQ----LDHKDIMGMMVDILMAAIDTTAYTTSFVLYHIXR 650
           L  S DS + + +L  FLQ       +D+K +  ++++I++A  DTTA   ++ LY + +
Sbjct: 251 LSNSHDSGSRQDILSRFLQATTSDSVVDYKYLRDIILNIVIAGKDTTAGALAWFLYMVCK 310

Query: 651 N 653
           +
Sbjct: 311 H 311


>12_01_0629 - 5183504-5184970
          Length = 488

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +3

Query: 495 DDSKNDKSLLKTFLQQPQLDHKDIMGMMVDILMAAIDTTAYTTSFVLYHIXRN 653
           D  K+    L   +   +L  +D+  ++ DIL A  +TT  T  + +  + RN
Sbjct: 254 DQCKDVLDSLLVLMSTGKLSRRDVKILLFDILAAGTETTKITVEWAMAELLRN 306


>04_04_0867 +
           28865857-28866657,28866778-28867113,28867248-28867451,
           28867567-28867746
          Length = 506

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +3

Query: 552 DHKDIMGMMVDILMAAIDTTAYTTSFVLYHIXRN 653
           D+K I  ++++ ++A  DTTA T S+ LY + +N
Sbjct: 289 DNKYIRDIILNFVIAGRDTTAGTLSWFLYAVCKN 322


>09_04_0476 -
           17922072-17922469,17922546-17923241,17923405-17923569,
           17923670-17924105,17924314-17924739
          Length = 706

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +3

Query: 369 LDKGFLWKM--FSTPLYKKLVNSQIYLXKISTXILIXKINLFESDDSKNDKSLLKTFL 536
           LD  F+ K+  F   +   +  SQ+      T  L+ + N+F  D  +N+KSL   FL
Sbjct: 542 LDVNFMAKVSDFGASILAPINKSQLVTLVQGTWELLTRKNVFNLDAPENEKSLSMRFL 599


>07_01_0827 - 6664723-6665346,6666636-6667559
          Length = 515

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +3

Query: 189 PGPRSYPIIGTLHKYLP 239
           PGP + P+IG++H ++P
Sbjct: 38  PGPSTLPLIGSIHHFVP 54


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,520,353
Number of Sequences: 37544
Number of extensions: 294637
Number of successful extensions: 688
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)