Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E14
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    48   1e-07
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.5  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 47.6 bits (108), Expect = 1e-07
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
 Frame = +3

Query: 384 LWKMFSTPLYKKLVNSQIYLXKISTXILIXKINLFESDDSKND--KSLLKTFLQQPQLDH 557
           LWK+  T  YK+L+ S+  +  I + I+   I   + DD+K++  +++ ++ L+Q  LD 
Sbjct: 259 LWKLLPTCAYKQLIESEDAIYNIISEIIETTIQ-EKRDDAKDESVEAIFQSILRQKNLDI 317

Query: 558 KDIMGMMVDILMAAIDTTAYTTSFVLYHIXRN 653
           +D    +VD + A I T   T  F+   I RN
Sbjct: 318 RDKKAAIVDFIAAGIHTLGNTLVFLFDLIGRN 349


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 554 SQGYHGNDG*YSNGCNRYNS 613
           SQ + G D    N CN YN+
Sbjct: 361 SQVFRGRDANRQNSCNIYNA 380


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 480 NLFESDDSKNDKSLLKTFLQ 539
           NL E+ D+ NDK  +  F+Q
Sbjct: 63  NLVENLDNYNDKEAVNEFMQ 82


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 180 EDIPGPRSYPIIG 218
           E IPGP + P+IG
Sbjct: 42  EKIPGPPALPLIG 54


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 480 NLFESDDSKNDKSLLKTFLQ 539
           NL E+ D+ NDK  +  F+Q
Sbjct: 63  NLVENLDNYNDKEAVNEFMQ 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,726
Number of Sequences: 438
Number of extensions: 3655
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)