Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E13
         (413 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22C68 Cluster: Putative uncharacterized protein; n=1; ...    31   7.1  
UniRef50_A3LRT9 Cluster: Mannosyltransferase; n=1; Pichia stipit...    31   7.1  

>UniRef50_Q22C68 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 3882

 Score = 31.5 bits (68), Expect = 7.1
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 396  NPFELYQSKCYNLTGIKNL 340
            NPF LY+SKCY+   IK L
Sbjct: 2542 NPFSLYKSKCYSCKSIKQL 2560


>UniRef50_A3LRT9 Cluster: Mannosyltransferase; n=1; Pichia
           stipitis|Rep: Mannosyltransferase - Pichia stipitis
           (Yeast)
          Length = 802

 Score = 31.5 bits (68), Expect = 7.1
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 128 MAGHMHMPRFKEKIIIVFSLLLFFVCV 208
           M   +H+PR K+K+I+   L+L+ +CV
Sbjct: 1   MRDKLHVPRSKQKVIVYAGLVLWLICV 27


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 315,812,169
Number of Sequences: 1657284
Number of extensions: 4676960
Number of successful extensions: 7503
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7500
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19042509735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)