Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E13
         (413 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094873-1|AAM11226.1|  994|Drosophila melanogaster RE41093p pro...    28   5.6  
AE014296-1548|AAF50346.1|  994|Drosophila melanogaster CG5660-PA...    28   5.6  

>AY094873-1|AAM11226.1|  994|Drosophila melanogaster RE41093p
           protein.
          Length = 994

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 312 NIHFMTLGLTNFLFQLNCNTLIDTTQ 389
           N H  T  L  F +Q  C+T ++TT+
Sbjct: 745 NFHLATAALKTFFYQYLCDTYLETTK 770


>AE014296-1548|AAF50346.1|  994|Drosophila melanogaster CG5660-PA
           protein.
          Length = 994

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 312 NIHFMTLGLTNFLFQLNCNTLIDTTQ 389
           N H  T  L  F +Q  C+T ++TT+
Sbjct: 745 NFHLATAALKTFFYQYLCDTYLETTK 770


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,878,574
Number of Sequences: 53049
Number of extensions: 211688
Number of successful extensions: 241
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)