Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_E12
(488 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4WI54 Cluster: Ribosomal protein L34 protein, putative... 71 1e-11
UniRef50_Q42351 Cluster: 60S ribosomal protein L34-1; n=29; Euka... 66 3e-10
UniRef50_P49207 Cluster: 60S ribosomal protein L34; n=62; Fungi/... 66 4e-10
UniRef50_Q4MZM9 Cluster: 60S ribosomal protein L34a, putative; n... 63 3e-09
UniRef50_Q5CVM8 Cluster: 60S ribosomal protein L34; n=2; Cryptos... 63 4e-09
UniRef50_P87262 Cluster: 60S ribosomal protein L34-A; n=55; Euka... 61 1e-08
UniRef50_A7AVD9 Cluster: Ribosomal protein L34, putative; n=1; B... 61 1e-08
UniRef50_Q7RF49 Cluster: Ribosomal protein L34e, putative; n=5; ... 59 5e-08
UniRef50_UPI000049A50B Cluster: 60S ribosomal protein L34; n=3; ... 57 2e-07
UniRef50_Q17JY6 Cluster: Ribosomal protein L34, putative; n=1; A... 55 1e-06
UniRef50_A0D0J3 Cluster: Chromosome undetermined scaffold_33, wh... 54 1e-06
UniRef50_Q6E6C0 Cluster: Large subunit ribosomal protein L34e; n... 52 7e-06
UniRef50_Q4Q141 Cluster: 60S ribosomal protein L34, putative; n=... 52 9e-06
UniRef50_Q8SSA2 Cluster: 60S ribosomal protein L34; n=1; Encepha... 50 4e-05
UniRef50_A2DT99 Cluster: Ribosomal protein L34e, putative; n=3; ... 42 0.007
UniRef50_O14396 Cluster: Putative uncharacterized protein; n=1; ... 37 0.28
UniRef50_A1RXV1 Cluster: Ribosomal protein L34e; n=1; Thermofilu... 33 3.4
UniRef50_A2R593 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
UniRef50_UPI00003AD95B Cluster: PREDICTED: hypothetical protein;... 32 7.9
UniRef50_Q3LW25 Cluster: Ribosomal protein L34; n=1; Bigelowiell... 32 7.9
UniRef50_P58026 Cluster: 50S ribosomal protein L34e; n=4; Thermo... 32 7.9
>UniRef50_Q4WI54 Cluster: Ribosomal protein L34 protein, putative;
n=10; Eukaryota|Rep: Ribosomal protein L34 protein,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 192
Score = 70.9 bits (166), Expect = 1e-11
Identities = 39/76 (51%), Positives = 45/76 (59%)
Frame = +3
Query: 123 GRLVYQYVKKPKKIPRLWSMQEQTPLAIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVK 302
G L Y ++KK P+ + P I RP E S++ KKTV R YGG C CVK
Sbjct: 104 GELRYLHIKKKGTAPKCGDCGIKLP-GIPALRPREYSQISRPKKTVSRAYGGSRCAGCVK 162
Query: 303 QRIVRAFLIEEQKIVK 350
RIVRAFLIEEQKIVK
Sbjct: 163 DRIVRAFLIEEQKIVK 178
>UniRef50_Q42351 Cluster: 60S ribosomal protein L34-1; n=29;
Eukaryota|Rep: 60S ribosomal protein L34-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 120
Score = 66.5 bits (155), Expect = 3e-10
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +3
Query: 123 GRLVYQYVKKPKKIPRLWSMQEQTPLAIQPARPAE--RSRLCYRKKTVKRVYGGVLCHKC 296
G+LVYQ KK P+ + + I RP+E RSRL ++TV R YGGVL
Sbjct: 28 GKLVYQTTKKRASGPKC-PVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSA 86
Query: 297 VKQRIVRAFLIEEQKIVK 350
V++RI+RAFL+EEQKIVK
Sbjct: 87 VRERIIRAFLVEEQKIVK 104
Score = 50.0 bits (114), Expect = 3e-05
Identities = 25/49 (51%), Positives = 29/49 (59%)
Frame = +2
Query: 41 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPKAVVNAR 187
MVQRL +R R SY TKSNQ RIV+TPG L +K PK V +
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGK 49
>UniRef50_P49207 Cluster: 60S ribosomal protein L34; n=62;
Fungi/Metazoa group|Rep: 60S ribosomal protein L34 -
Homo sapiens (Human)
Length = 117
Score = 66.1 bits (154), Expect = 4e-10
Identities = 39/79 (49%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +3
Query: 126 RLVYQYVKKPKKIPR-LWSMQEQTPLAIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVK 302
R+VY Y KK K P+ + ++ RP RL KK V R YGG +C KCV+
Sbjct: 29 RIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVR 88
Query: 303 QRIVRAFLIEEQKI-VKVL 356
RI RAFLIEEQKI VKVL
Sbjct: 89 DRIKRAFLIEEQKIVVKVL 107
Score = 49.6 bits (113), Expect = 4e-05
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +2
Query: 41 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPKA 172
MVQRLT+RRRLSYNT SN+ R+ RTPG + +K + PK+
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKS 44
>UniRef50_Q4MZM9 Cluster: 60S ribosomal protein L34a, putative; n=4;
Eukaryota|Rep: 60S ribosomal protein L34a, putative -
Theileria parva
Length = 138
Score = 63.3 bits (147), Expect = 3e-09
Identities = 35/75 (46%), Positives = 42/75 (56%)
Frame = +3
Query: 126 RLVYQYVKKPKKIPRLWSMQEQTPLAIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQ 305
RLV +KK K PR + +T + RP L R +TV R YGG CH CVK
Sbjct: 29 RLVLHNLKKVGKRPRCGDCK-RTLAGVSAVRPFLYKNLKRRNRTVSRPYGGSRCHNCVKD 87
Query: 306 RIVRAFLIEEQKIVK 350
RI+RAFL EEQK V+
Sbjct: 88 RIIRAFLKEEQKCVR 102
Score = 37.1 bits (82), Expect = 0.21
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +2
Query: 41 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPK 169
MVQR+ +RRR Y T SN + VRTPG L L +K + P+
Sbjct: 1 MVQRVHYRRRNKYKTPSNVVKRVRTPGARLVLHNLKKVGKRPR 43
>UniRef50_Q5CVM8 Cluster: 60S ribosomal protein L34; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L34 -
Cryptosporidium parvum Iowa II
Length = 138
Score = 62.9 bits (146), Expect = 4e-09
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +3
Query: 123 GRLVYQYVKKPKKIPRLWSMQEQTPLAIQPA-RPAERSRLCYRKKTVKRVYGGVLCHKCV 299
GR + Q + K P+ ++ PLA PA P E L R++TV R YGG C CV
Sbjct: 31 GRNLIQNIGKVYSRPKCGDCKK--PLAGIPACAPYEMKHLKKRERTVARAYGGTKCPTCV 88
Query: 300 KQRIVRAFLIEEQKIVK 350
+QRI+RAFL+EEQK+VK
Sbjct: 89 RQRILRAFLLEEQKVVK 105
Score = 40.7 bits (91), Expect = 0.017
Identities = 23/58 (39%), Positives = 32/58 (55%)
Frame = +2
Query: 38 KMVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPKAVVNARANSAGYPA 211
KM R+T+RR+ YNT SN+ R+V+TPG + K PK + + AG PA
Sbjct: 3 KMSPRVTYRRKCRYNTPSNRVRVVKTPGGRNLIQNIGKVYSRPKC-GDCKKPLAGIPA 59
>UniRef50_P87262 Cluster: 60S ribosomal protein L34-A; n=55;
Eukaryota|Rep: 60S ribosomal protein L34-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 121
Score = 61.3 bits (142), Expect = 1e-08
Identities = 35/76 (46%), Positives = 42/76 (55%)
Frame = +3
Query: 123 GRLVYQYVKKPKKIPRLWSMQEQTPLAIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVK 302
G L Q+VKK P+ I RP + + + KTV R YGG C CVK
Sbjct: 28 GILRAQHVKKLATRPKCGDCGSALQ-GISTLRPRQYATVSKTHKTVSRAYGGSRCANCVK 86
Query: 303 QRIVRAFLIEEQKIVK 350
+RI+RAFLIEEQKIVK
Sbjct: 87 ERIIRAFLIEEQKIVK 102
Score = 44.4 bits (100), Expect = 0.001
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 41 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPK 169
M QR+TFRRR YNT+SN+ ++V+TPG L +K PK
Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPK 43
>UniRef50_A7AVD9 Cluster: Ribosomal protein L34, putative; n=1;
Babesia bovis|Rep: Ribosomal protein L34, putative -
Babesia bovis
Length = 157
Score = 60.9 bits (141), Expect = 1e-08
Identities = 41/94 (43%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +3
Query: 72 CRTTQNQIKEE**GHRAGRLVYQYVKKPKKIPRLWSMQEQTPLAIQPA-RPAERSRLCYR 248
CR K+ GRLV Q K + P+ + LA PA RP L R
Sbjct: 11 CRYNTRSNKQRKVKTPGGRLVVQRRVKVAQGPKCGDCK--CKLAGIPALRPHLYRNLKKR 68
Query: 249 KKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 350
++ V R YGGV CHKCVK RI+RAFL EEQK +K
Sbjct: 69 ERRVSRAYGGVRCHKCVKDRIIRAFLKEEQKALK 102
Score = 44.4 bits (100), Expect = 0.001
Identities = 24/57 (42%), Positives = 33/57 (57%)
Frame = +2
Query: 41 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPKAVVNARANSAGYPA 211
MVQR+ RR YNT+SN++R V+TPG L + K + PK + + AG PA
Sbjct: 1 MVQRVVLRRHCRYNTRSNKQRKVKTPGGRLVVQRRVKVAQGPKC-GDCKCKLAGIPA 56
>UniRef50_Q7RF49 Cluster: Ribosomal protein L34e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L34e, putative -
Plasmodium yoelii yoelii
Length = 164
Score = 59.3 bits (137), Expect = 5e-08
Identities = 29/76 (38%), Positives = 42/76 (55%)
Frame = +3
Query: 123 GRLVYQYVKKPKKIPRLWSMQEQTPLAIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVK 302
G+L +KK P+ + ++ RPA+ R + + V R YGG +C KC K
Sbjct: 28 GKLTIHVIKKKAGKPKCADCKNPIQ-GVKALRPADNQRARKKDRKVSRAYGGSICAKCXK 86
Query: 303 QRIVRAFLIEEQKIVK 350
+RI+RAFL EEQK V+
Sbjct: 87 ERIMRAFLFEEQKCVR 102
Score = 42.3 bits (95), Expect = 0.006
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +2
Query: 41 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPK 169
M QR+ +R+ YNTKSN+ R +RTPG L + V +K PK
Sbjct: 1 MAQRVHYRKHNHYNTKSNKVRPIRTPGGKLTIHVIKKKAGKPK 43
>UniRef50_UPI000049A50B Cluster: 60S ribosomal protein L34; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L34 - Entamoeba histolytica HM-1:IMSS
Length = 137
Score = 56.8 bits (131), Expect = 2e-07
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +3
Query: 204 IQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKV 353
I+ RP + L K+TV R YGGV CHKCV+++I+RAFLI E ++K+
Sbjct: 54 IRHIRPHQYGWLGKSKRTVTRAYGGVRCHKCVQKKILRAFLINEHNLIKL 103
Score = 34.7 bits (76), Expect = 1.1
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 41 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQK 151
M R+T+ R+ SYNTKSN RIV+T G + + QK
Sbjct: 1 MAVRVTYVRKHSYNTKSNGIRIVKTAGGNMTVQHRQK 37
>UniRef50_Q17JY6 Cluster: Ribosomal protein L34, putative; n=1;
Aedes aegypti|Rep: Ribosomal protein L34, putative -
Aedes aegypti (Yellowfever mosquito)
Length = 123
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/77 (40%), Positives = 50/77 (64%)
Frame = +3
Query: 126 RLVYQYVKKPKKIPRLWSMQEQTPLAIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQ 305
RLVY ++KK + + + + + A++ + + +C KTV R +GGV+CH+ +
Sbjct: 27 RLVYLFIKKQRIVSKCCQCKGE---AVRN-QASVHVCMCRCLKTVIRTFGGVICHR---E 79
Query: 306 RIVRAFLIEEQKIVKVL 356
RI+RAFLI+EQK+VKVL
Sbjct: 80 RIIRAFLIDEQKVVKVL 96
>UniRef50_A0D0J3 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 108
Score = 54.4 bits (125), Expect = 1e-06
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 123 GRLVYQYVKKPKKIPRLWSMQEQTPL-AIQPARPAERSRLCYRKKTVKRVYGGVLCHKCV 299
G +V QY K L ++ RP + +L R++TV R YGGVL +
Sbjct: 28 GNVVVQYPNKKTSASTCADSNLNVVLNGLKRIRPTKLKQLARRQRTVSRPYGGVLSAGAL 87
Query: 300 KQRIVRAFLIEEQKIVK 350
K RI+RAFL+EE KIVK
Sbjct: 88 KNRIIRAFLVEEVKIVK 104
Score = 39.1 bits (87), Expect = 0.052
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +2
Query: 50 RLTFRRRLSYNTKSNQRRIVRTPG 121
R+T+RRR SYNT+SN+ R V+TPG
Sbjct: 4 RITYRRRTSYNTRSNKIRKVKTPG 27
>UniRef50_Q6E6C0 Cluster: Large subunit ribosomal protein L34e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L34e - Antonospora locustae (Nosema locustae)
Length = 113
Score = 52.0 bits (119), Expect = 7e-06
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +3
Query: 126 RLVYQYVKKPKKIPRLWSMQEQTPLAIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQ 305
R VY KKP ++P+ + + I RPA +RL ++TV R YGG LC C++
Sbjct: 29 RRVYIPKKKPGRVPKCVKCRSKLR-GIDICRPAAFARLRKSQRTVARTYGGNLCGSCLEN 87
Query: 306 RIVRAFLIEEQKIV 347
RI+ AFL E++++
Sbjct: 88 RILDAFLSAEEQLL 101
Score = 37.9 bits (84), Expect = 0.12
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +2
Query: 41 MVQRLTFRRRLSYNTKSNQRRIVRTPG 121
MVQ LT R R +YN SNQ++I RTPG
Sbjct: 1 MVQHLTHRGRRTYNNASNQKKIRRTPG 27
>UniRef50_Q4Q141 Cluster: 60S ribosomal protein L34, putative; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein L34,
putative - Leishmania major
Length = 168
Score = 51.6 bits (118), Expect = 9e-06
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = +3
Query: 231 SRLCYR-KKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVK 350
+RL R +K+V R YGGVL H V+ R+VRAFL+EEQ+IVK
Sbjct: 65 ARLASRHEKSVSRAYGGVLSHDQVRDRVVRAFLVEEQRIVK 105
Score = 33.1 bits (72), Expect = 3.4
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 50 RLTFRRRLSYNTKSNQRRIVRTPG 121
R+ +RRR+ Y T+ N+ ++VRTPG
Sbjct: 5 RVQYRRRMHYATRGNRMKMVRTPG 28
>UniRef50_Q8SSA2 Cluster: 60S ribosomal protein L34; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L34
- Encephalitozoon cuniculi
Length = 110
Score = 49.6 bits (113), Expect = 4e-05
Identities = 33/98 (33%), Positives = 50/98 (51%)
Frame = +3
Query: 54 LHSGDDCRTTQNQIKEE**GHRAGRLVYQYVKKPKKIPRLWSMQEQTPLAIQPARPAERS 233
+H G +T N+ ++ +G+LV + VKK K R +I RPAE S
Sbjct: 6 IHKGATYKTRSNRRRKV--RTPSGKLVNRRVKKHSKKHRCHECNAILG-SIARMRPAEFS 62
Query: 234 RLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIV 347
R + V R YG C +CV+++I+ AFL E++IV
Sbjct: 63 RQKVSARRVNRPYGATTCGRCVREKIISAFLGNEERIV 100
>UniRef50_A2DT99 Cluster: Ribosomal protein L34e, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein L34e,
putative - Trichomonas vaginalis G3
Length = 116
Score = 41.9 bits (94), Expect = 0.007
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +3
Query: 126 RLVYQYVKKPKKIPRLWSMQEQTPLAIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQ 305
+LV Y+ K + P ++ I+ + E R+ ++TV R YGGV C VK
Sbjct: 30 KLVAHYIAKRQNGPHCAETGKRIN-GIKCVKTCELRRMKKNQRTVSRPYGGVYCGAVVKD 88
Query: 306 RIVRAFLIEE 335
RI+ AF+ EE
Sbjct: 89 RIINAFMEEE 98
>UniRef50_O14396 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 97
Score = 36.7 bits (81), Expect = 0.28
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 135 YQYVKKPKKIPRLWSMQEQTPLAIQPARP-AERSRLCYRKKTVKRVYGGVLCHKCVKQRI 311
Y ++KK IPR PL PA +RL + KKTV+R YGG L V+ I
Sbjct: 36 YLHIKKLGTIPRCGDTG--VPLQGIPALVLVSLTRLSHNKKTVQRAYGGCLSANAVRS-I 92
Query: 312 VRAF 323
VRAF
Sbjct: 93 VRAF 96
>UniRef50_A1RXV1 Cluster: Ribosomal protein L34e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L34e - Thermofilum
pendens (strain Hrk 5)
Length = 91
Score = 33.1 bits (72), Expect = 3.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 68 RLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPKAVVNAR 187
R + ++S +R++VRTPG L L V K + PK + R
Sbjct: 3 RPALRSRSKKRKLVRTPGGRLALHVIDKKHDYPKCAICGR 42
>UniRef50_A2R593 Cluster: Putative uncharacterized protein; n=1;
Aspergillus niger|Rep: Putative uncharacterized protein
- Aspergillus niger
Length = 174
Score = 32.3 bits (70), Expect = 6.0
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 19 PAVKKLENGAAAYIQATTVV-QHKIKSKKNSKDTGLAAWFISMSKSPRRSQGCGQCKSKL 195
PA ++ +G AA ++ T +V + K+ +N K T L + +KS + GCG + ++
Sbjct: 64 PASQQATSGMAASVRRTILVFLYGGKNVRNGKFTSLYPFGTHTAKSHGANGGCGSVRYRM 123
Query: 196 RW 201
W
Sbjct: 124 EW 125
>UniRef50_UPI00003AD95B Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 1221
Score = 31.9 bits (69), Expect = 7.9
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -2
Query: 382 DLVLACCALRTFTIFCSSIKKALTMRCLTHLWQR 281
DL LA C T C+ AL CLT LW R
Sbjct: 421 DLTLAVCLSVFITFLCAFCLGALARPCLTRLWMR 454
>UniRef50_Q3LW25 Cluster: Ribosomal protein L34; n=1; Bigelowiella
natans|Rep: Ribosomal protein L34 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 90
Score = 31.9 bits (69), Expect = 7.9
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 246 RKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKV 353
+K + R+YG + HK VKQ+++ FL E K +++
Sbjct: 54 KKPRLSRIYGKEIHHKIVKQKLLIKFLKTENKSLRI 89
>UniRef50_P58026 Cluster: 50S ribosomal protein L34e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L34e - Aeropyrum
pernix
Length = 95
Score = 31.9 bits (69), Expect = 7.9
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 195 PLAIQP-ARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRA 320
PL P RP RL K +R YGGVLC C+ + I A
Sbjct: 48 PLGGVPRGRPPRVRRLSKTAKRPERPYGGVLCSTCLAEMIFEA 90
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,301,566
Number of Sequences: 1657284
Number of extensions: 7074171
Number of successful extensions: 18107
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 17794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18102
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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