Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E12
         (488 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    24   3.2  
AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    23   7.4  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    23   7.4  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    22   9.8  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   9.8  

>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 168 RLWSMQEQTPLAIQPARP 221
           R+W++Q +TP    P RP
Sbjct: 29  RIWNIQMETPADHNPERP 46


>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 361 ALRTFTIFCSSIKKALTMRCLTHLWQRTP 275
           ALRT    CS I+K   ++ +T L+   P
Sbjct: 74  ALRTKCARCSPIQKENALKIITRLYYDYP 102


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 361 ALRTFTIFCSSIKKALTMRCLTHLWQRTP 275
           ALRT    CS I+K   ++ +T L+   P
Sbjct: 74  ALRTKCARCSPIQKENALKIITRLYYDYP 102


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 2    ELFLXHQLSKSLKMVQRLTFRRRLSYNTKSNQRRIVR 112
            EL L H+L+ S K +  L  RR+     +  ++ I+R
Sbjct: 1100 ELDLGHRLTLSRKTLNVLDTRRKSMAEQRKIRKSIIR 1136


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 264 RVYGGVLCHKCVKQ 305
           ++Y GVL  KC+K+
Sbjct: 290 QIYMGVLTQKCIKE 303


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,369
Number of Sequences: 2352
Number of extensions: 7354
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)